; fetch-sequences -v 1 -genome canFam2 -header_format galaxy -i $RSAT/public_html/tmp/wwwrun/2014/09/03/do61+do79_cfam_CEBPA_liver.SWEMBL.3.3_tesj_20140903_093347.bed -o $RSAT/public_html/tmp/wwwrun/2014/09/03/do61+do79_cfam_CEBPA_liver.SWEMBL.3.3_tesj_20140903_093347.fasta ; Program version 1.34 ; Genome canFam2 ; DAS server URL http://genome.cse.ucsc.edu/cgi-bin/das/canFam2 ; Reference segment ; Upstream extension 0 ; Downstream extension 0 ; Invalid rows in query file 2 ; Input files ; input /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/do61+do79_cfam_CEBPA_liver.SWEMBL.3.3_tesj_20140903_093347.bed ; Output files ; log /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/do61+do79_cfam_CEBPA_liver.SWEMBL.3.3_tesj_20140903_093347_log.txt ; output /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/do61+do79_cfam_CEBPA_liver.SWEMBL.3.3_tesj_20140903_093347.fasta ; Skipped 2 rows in query file ; line 6480 chr12 75515450 75515499 36 50 9 35.426378 0 74.000000 75515474.5 right > chromosome end (75515492). ; line 29237 chr33 34424434 34424486 48 53 12 34.562279 9 76.000000 34424478 right > chromosome end (34424479). ; sequences 43038 ; length sum 11001060 ; Host name rsat ; Job started 2014-09-03.093348 ; Job done 2014-09-03.093452 ; Seconds 4.44 ; user 4.44 ; system 0.12 ; cuser 0 ; csystem 0