/home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab
 Program version       	1.118
 Input files
	file2 	$RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf
	file1 	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	alignments_1ton	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_alignments_1ton.tab
	match_table_txt	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab
	html_index   	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_index.html
	alignments_1ton_html	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_alignments_1ton.html
	match_table_html	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.html
	prefix       	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates
 Matrices
	file1	30 matrices	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	15	3324	dkATTGTGCAATCwt
		file1	2	10	9991	waCAAAACwa
		file1	3	10	8972	hyCTGCAGrd
		file1	4	13	1349	ttTTCTTTTCTtt
		file1	5	15	2728	atGATTGCACAACwy
		file1	6	15	897	wwAGATTGTGAAAtm
		file1	7	15	678	dkATTACGCAAGArw
		file1	8	13	352	rmAGTTGCAAAay
		file1	9	18	119	wvATGTTGCACAACAGtr
		file1	10	24	7	TyTTTTyTTTTTTWAARwAAATmv
		file1	11	15	2972	wkATTGCACAATcwy
		...	20 more matrices
	file2	263 matrices	$RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf
		file2		1		11		26		wwyTGyGGTww
		file2		2		9		185		GCCcbrrGs
		file2		3		6		20		CACGTG
		file2		4		6		24		yGCGTG
		file2		5		22		24		hwwrGmACryyvtGTwCchrms
		file2		6		11		40		CTAGGTGTGAA
		file2		7		20		12		drvkcasygrwGcRkrrCsr
		file2		8		14		13		TGAmCTTTGmmCyt
		file2		9		12		16		bbkGrTGACGym
		file2		10		12		39		rrrTGCAATmcc
		file2		11		8		10		TTTsGCGC
		...	253 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	logoDP       	Dot product between the logo matrices.
	8	NIcor        	Normalized Pearson correlation between the information content matrices. NIcor = Icor * Wr
	9	NSW          	Normalized Sandelin-Wasserman similarity. NSW = SW/w
	10	SSD          	sum of squared distance.
	11	NsEucl       	relative Euclidian similarity. NsEucl = (max(dEucl) - dEucl)/max(dEucl)
	12	w1           	Width of the first matrix
	13	w2           	Width of the second matrix
	14	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	15	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	16	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	17	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	18	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	19	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	20	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
	21	consensus1   	IUPAC consensus of matrix 1 (dots represent non-aligned columns)
	22	consensus2   	IUPAC consensus of matrix 2 (dots represent non-aligned columns)
	23	rcor         	Matching rank for cor
	24	rNcor        	Matching rank for Ncor
	25	rlogoDP      	Matching rank for logoDP
	26	rNIcor       	Matching rank for NIcor
	27	rNsEucl      	Matching rank for NsEucl
	28	rSSD         	Matching rank for SSD
	29	rNSW         	Matching rank for NSW
	30	rank_mean    	Mean of the matching ranks on all selected metrics
	31	match_rank   	Rank of the match (sorting by rank_mean)
id1 id2 name1 name2 cor Ncor logoDP NIcor NSW SSD NsEucl w1 w2 w W Wr wr1 wr2 strand offset consensus1 consensus2 rcor rNcor rlogoDP rNIcor rNsEucl rSSD rNSW rank_mean match_rank
oligos_6nt_mkv4_m5 MA0102.3 oligos_6nt_mkv4_m5 CEBPA 0.936 0.687 9.841 0.673 0.963 0.8198 0.94180 15 11 11 15 0.7333 0.7333 1.0000 D 3 ...ATTGCACAACw. aTTGCAyAAym 2 10 9 10 2 4 2 5.5714 1
oligos_7nt_mkv5_m1 MA0102.3 oligos_7nt_mkv5_m1 CEBPA 0.935 0.685 9.923 0.674 0.959 0.9073 0.93877 15 11 11 15 0.7333 0.7333 1.0000 D 2 ..ATTGCACAATc.. aTTGCAyAAym 3 11 5 9 4 7 4 6.1429 2
oligos_7nt_mkv5_m1 MA0466.1 oligos_7nt_mkv5_m1 CEBPB 0.934 0.685 9.857 0.677 0.961 0.8652 0.94021 15 11 11 15 0.7333 0.7333 1.0000 D 1 .kATTGCACAAT... kATTGCAymAy 4 12 8 8 3 6 3 6.2857 3
oligos_6nt_mkv4_m5 MA0466.1 oligos_6nt_mkv4_m5 CEBPB 0.887 0.650 9.684 0.629 0.934 1.4451 0.92272 15 11 11 15 0.7333 0.7333 1.0000 D 2 ..GATTGCACAAC.. kATTGCAymAy 8 23 14 18 10 20 13 15.1429 4
oligos_8nt_mkv6_m1 MA0102.3 oligos_8nt_mkv6_m1 CEBPA 0.882 0.647 9.868 0.623 0.934 1.4610 0.92230 15 11 11 15 0.7333 0.7333 1.0000 D 3 ...GTTGCACAACw. aTTGCAyAAym 10 26 6 20 11 21 15 15.5714 5
oligos_8nt_mkv6_m4 MA0043.1 oligos_8nt_mkv6_m4 HLF 0.859 0.793 6.302 0.770 0.934 1.5846 0.92582 13 12 12 13 0.9231 0.9231 1.0000 D 0 wrTTACACAATa. krTTACryAAth 25 1 44 1 6 27 14 16.8571 6
positions_8nt_m1 MA0102.3 positions_8nt_m1 CEBPA 0.888 0.610 9.450 0.600 0.938 1.3623 0.92497 16 11 11 16 0.6875 0.6875 1.0000 D 4 ....ATTGCAAAACw. aTTGCAyAAym 7 41 20 27 7 16 10 18.2857 7
positions_7nt_m2 MA0102.3 positions_7nt_m2 CEBPA 0.886 0.573 10.142 0.557 0.928 1.5884 0.91898 17 11 11 17 0.6471 0.6471 1.0000 D 4 ....ATTGCACAACT.. aTTGCAyAAym 9 53 2 31 15 28 20 22.5714 8
oligos_6nt_mkv4_m1 MA0102.3 oligos_6nt_mkv4_m1 CEBPA 0.948 0.695 4.203 0.060 0.968 0.7061 0.94598 15 11 11 15 0.7333 0.7333 1.0000 R 1 .kATTGTGCAAT... KRTTRTGCAAT 1 7 66 82 1 1 1 22.7143 9
positions_7nt_m1 MA0466.1 positions_7nt_m1 CEBPB 0.862 0.632 9.270 0.609 0.924 1.6734 0.91684 15 11 11 15 0.7333 0.7333 1.0000 D 1 .tATTTCACAAT... kATTGCAymAy 20 33 25 23 18 32 24 25.0000 10
positions_8nt_m4 MA0102.3 positions_8nt_m4 CEBPA 0.844 0.663 9.784 0.657 0.918 1.8107 0.91350 14 11 11 14 0.7857 0.7857 1.0000 D 2 ..ATTGCCCAATa. aTTGCAyAAym 33 19 10 12 26 46 32 25.4286 11
positions_7nt_m2 MA0466.1 positions_7nt_m2 CEBPB 0.875 0.566 10.055 0.546 0.922 1.7084 0.91598 17 11 11 17 0.6471 0.6471 1.0000 D 3 ...GATTGCACAAC... kATTGCAymAy 14 56 3 33 19 35 25 26.4286 12
oligos_8nt_mkv6_m2 MA0102.3 oligos_8nt_mkv6_m2 CEBPA 0.879 0.691 4.259 0.146 0.937 1.3963 0.92404 14 11 11 14 0.7857 0.7857 1.0000 R 1 .kATTGTGAAAT.. KRTTRTGCAAT 11 8 64 71 8 17 11 27.1429 13
positions_8nt_m5 MA0102.3 positions_8nt_m5 CEBPA 0.872 0.564 10.265 0.542 0.922 1.7214 0.91566 17 11 11 17 0.6471 0.6471 1.0000 D 4 ....GTTGCACAAyA.. aTTGCAyAAym 16 58 1 34 21 37 27 27.7143 14
oligos_8nt_mkv6_m3 MA0102.3 oligos_8nt_mkv6_m3 CEBPA 0.875 0.687 4.343 0.142 0.935 1.4372 0.92294 14 11 11 14 0.7857 0.7857 1.0000 R 1 .tATTGAGCAAT.. KRTTRTGCAAT 13 9 62 74 9 19 12 28.2857 15
positions_7nt_m1 MA0102.3 positions_7nt_m1 CEBPA 0.858 0.629 9.274 0.601 0.918 1.8006 0.91374 15 11 11 15 0.7333 0.7333 1.0000 D 2 ..ATTTCACAATC.. aTTGCAyAAym 26 35 24 26 25 45 31 30.2857 16
oligos_6nt_mkv4_m1 MA0466.1 oligos_6nt_mkv4_m1 CEBPB 0.924 0.678 2.820 -0.039 0.954 1.0120 0.93533 15 11 11 15 0.7333 0.7333 1.0000 R 2 ..ATTGTGCAATC.. RTKRTGCAATM 5 15 81 97 5 8 5 30.8571 17
positions_8nt_m4 MA0466.1 positions_8nt_m4 CEBPB 0.829 0.652 9.665 0.650 0.910 1.9793 0.90956 14 11 11 14 0.7857 0.7857 1.0000 D 1 .tATTGCCCAAT.. kATTGCAymAy 46 21 15 15 37 58 40 33.1429 18
positions_7nt_m3 MA0102.2 positions_7nt_m3 CEBPA 0.914 0.514 3.782 0.178 0.940 1.0827 0.91825 16 9 9 16 0.5625 0.5625 1.0000 R 4 ....ATTGCGAAA... RTTGCRMAA 6 78 68 66 17 9 8 36.0000 19
oligos_8nt_mkv6_m3 MA0466.1 oligos_8nt_mkv6_m3 CEBPB 0.870 0.683 2.614 -0.034 0.932 1.4915 0.92149 14 11 11 14 0.7857 0.7857 1.0000 R 2 ..ATTGAGCAATa. RTKRTGCAATM 19 14 86 95 13 22 16 37.8571 20
oligos_8nt_mkv6_m4 MA0102.3 oligos_8nt_mkv6_m4 CEBPA 0.809 0.685 9.041 0.680 0.905 2.0987 0.90688 13 11 11 13 0.8462 0.8462 1.0000 D 1 .rTTACACAATa. aTTGCAyAAym 67 13 26 7 42 63 49 38.1429 21
oligos_8nt_mkv6_m3 MA0102.1 oligos_8nt_mkv6_m3 Cebpa 0.828 0.607 6.269 0.604 0.917 1.8164 0.91336 14 12 11 15 0.7333 0.7857 0.9167 D 3 ...TTGAGCAATaw TtkygCAAyvy. 47 43 47 25 27 47 33 38.4286 22
oligos_7nt_mkv5_m5 MA0102.3 oligos_7nt_mkv5_m5 CEBPA 0.803 0.736 9.717 0.722 0.900 2.2101 0.90444 12 11 11 12 0.9167 0.9167 1.0000 D 1 .rTTGCTCAAya aTTGCAyAAym 72 2 12 2 49 73 60 38.5714 23
oligos_8nt_mkv6_m2 MA0466.1 oligos_8nt_mkv6_m2 CEBPB 0.860 0.676 2.835 0.043 0.927 1.6082 0.91848 14 11 11 14 0.7857 0.7857 1.0000 R 2 ..ATTGTGAAATa. RTKRTGCAATM 24 16 80 89 16 30 22 39.5714 24
oligos_6nt_mkv4_m1 MA0078.1 oligos_6nt_mkv4_m1 Sox17 0.861 0.431 6.882 0.426 0.932 1.0893 0.90775 15 9 8 16 0.5000 0.5333 0.8889 D -1 dkATTGTG....... .hyATTGTs 22 102 35 53 40 10 17 39.8571 25
positions_7nt_m1 MA0102.1 positions_7nt_m1 Cebpa 0.813 0.650 6.080 0.632 0.911 2.1398 0.91380 15 12 12 15 0.8000 0.8000 1.0000 D 3 ...TTTCACAATCwh TtkygCAAyvyb 61 22 55 16 24 67 39 40.5714 26
positions_8nt_m2 MA0102.1 positions_8nt_m2 Cebpa 0.825 0.605 6.398 0.593 0.911 1.9561 0.91009 14 12 11 15 0.7333 0.7857 0.9167 D 3 ...TTGAGCAATmw TtkygCAAyvy. 50 44 39 28 34 55 38 41.1429 27
oligos_8nt_mkv6_m5 MA0102.3 oligos_8nt_mkv6_m5 CEBPA 0.797 0.730 9.685 0.721 0.898 2.2422 0.90374 12 11 11 12 0.9167 0.9167 1.0000 D 1 .mTTGCCCAAya aTTGCAyAAym 77 3 13 3 52 76 65 41.2857 28
oligos_8nt_mkv6_m2 MA0078.1 oligos_8nt_mkv6_m2 Sox17 0.852 0.454 6.713 0.449 0.929 1.1433 0.90549 14 9 8 15 0.5333 0.5714 0.8889 D -1 wkATTGTG...... .hyATTGTs 28 99 36 52 47 12 19 41.8571 29
oligos_6nt_mkv4_m1 MA0102.1 oligos_6nt_mkv4_m1 Cebpa 0.811 0.649 6.234 0.631 0.909 2.1948 0.91270 15 12 12 15 0.8000 0.8000 1.0000 D 3 ...TTGTGCAATCwt TtkygCAAyvyb 64 25 50 17 29 70 42 42.4286 30
oligos_7nt_mkv5_m3 MA0043.1 oligos_7nt_mkv5_m3 HLF 0.788 0.727 5.794 0.702 0.908 2.2170 0.91226 13 12 12 13 0.9231 0.9231 1.0000 D 0 wrTTACACAAtw. krTTACryAAth 83 4 59 4 31 75 44 42.8571 31
oligos_8nt_mkv6_m1 MA0133.1 oligos_8nt_mkv6_m1 BRCA1 0.874 0.408 3.200 0.412 0.943 0.7951 0.90993 15 7 7 15 0.4667 0.4667 1.0000 D 8 ........ACAACwh mCAAcms 15 112 72 57 36 3 7 43.1429 32
positions_8nt_m3 MA0466.1 positions_8nt_m3 CEBPB 0.870 0.598 2.675 -0.037 0.930 1.5393 0.92025 16 11 11 16 0.6875 0.6875 1.0000 R 4 ....ATTGTGCAAga. RTKRTGCAATM 18 47 84 96 14 25 18 43.1429 33
oligos_6nt_mkv4_m5 MA0133.1 oligos_6nt_mkv4_m5 BRCA1 0.871 0.406 3.107 0.410 0.943 0.7913 0.91014 15 7 7 15 0.4667 0.4667 1.0000 D 8 ........ACAACwy mCAAcms 17 113 75 58 33 2 6 43.4286 34
oligos_8nt_mkv6_m4 MA0102.1 oligos_8nt_mkv6_m4 Cebpa 0.808 0.634 6.273 0.611 0.906 2.0631 0.90767 13 12 11 14 0.7857 0.8462 0.9167 D 2 ..TTACACAATah TtkygCAAyvy. 69 32 45 22 41 61 47 45.2857 35
positions_8nt_m1 MA0466.1 positions_8nt_m1 CEBPB 0.828 0.569 9.334 0.559 0.903 2.1300 0.90618 16 11 11 16 0.6875 0.6875 1.0000 D 3 ...GATTGCAAAAC.. kATTGCAymAy 48 55 22 30 44 66 52 45.2857 36
positions_8nt_m3 MA0102.3 positions_8nt_m3 CEBPA 0.861 0.592 4.254 0.040 0.919 1.7793 0.91425 16 11 11 16 0.6875 0.6875 1.0000 R 3 ...GATTGTGCAAg.. KRTTRTGCAAT 21 49 65 90 23 43 30 45.8571 37
positions_7nt_m3 MA0102.1 positions_7nt_m3 Cebpa 0.876 0.657 0.379 -0.212 0.927 1.7487 0.92208 16 12 12 16 0.7500 0.7500 1.0000 R 1 .rAGATTGCGAAA... VRBRTTGCRMAA 12 20 105 114 12 39 21 46.1429 38
positions_6nt_m1 MA0102.3 positions_6nt_m1 CEBPA 0.847 0.621 4.050 0.121 0.917 1.8195 0.91329 15 11 11 15 0.7333 0.7333 1.0000 R 3 ...GATTGTGAAAt. KRTTRTGCAAT 32 38 67 77 28 48 34 46.2857 39
oligos_8nt_mkv6_m1 MA0466.1 oligos_8nt_mkv6_m1 CEBPB 0.823 0.604 9.656 0.567 0.900 2.2106 0.90442 15 11 11 15 0.7333 0.7333 1.0000 D 2 ..GGTTGCACAAC.. kATTGCAymAy 52 45 16 29 50 74 61 46.7143 40
positions_6nt_m1 MA0466.1 positions_6nt_m1 CEBPB 0.848 0.622 2.740 0.033 0.921 1.7299 0.91545 15 11 11 15 0.7333 0.7333 1.0000 R 4 ....ATTGTGAAAtm RTKRTGCAATM 31 37 82 92 22 38 28 47.1429 41
oligos_8nt_mkv6_m3 MA0102.2 oligos_8nt_mkv6_m3 CEBPA 0.842 0.541 6.267 0.532 0.906 1.6908 0.89784 14 9 9 14 0.6429 0.6429 1.0000 D 3 ...TTGAGCAAT.. TtkygCAAy 35 66 48 36 70 34 48 48.1429 42
oligos_7nt_mkv5_m3 MA0102.3 oligos_7nt_mkv5_m3 CEBPA 0.790 0.669 8.675 0.664 0.897 2.2624 0.90331 13 11 11 13 0.8462 0.8462 1.0000 D 1 .rTTACACAAtw. aTTGCAyAAym 80 17 29 11 55 79 69 48.5714 43
oligos_7nt_mkv5_m1 MA0102.1 oligos_7nt_mkv5_m1 Cebpa 0.797 0.637 6.191 0.620 0.904 2.3145 0.91035 15 12 12 15 0.8000 0.8000 1.0000 D 3 ...TTGCACAATcwy TtkygCAAyvyb 78 30 53 21 32 83 51 49.7143 44
oligos_7nt_mkv5_m4 MA0084.1 oligos_7nt_mkv5_m4 SRY 0.848 0.424 6.358 0.414 0.920 1.1155 0.89331 12 9 7 14 0.5000 0.5833 0.7778 D -2 aaACAAA..... ..waACAAw 30 104 41 56 85 11 29 50.8571 45
oligos_7nt_mkv5_m5 MA0466.1 oligos_7nt_mkv5_m5 CEBPB 0.779 0.714 9.501 0.691 0.887 2.4777 0.89881 12 11 11 12 0.9167 0.9167 1.0000 D 0 wrTTGCTCAAy. kATTGCAymAy 91 5 19 5 68 97 85 52.8571 46
oligos_8nt_mkv6_m4 MA0466.1 oligos_8nt_mkv6_m4 CEBPB 0.784 0.664 8.817 0.654 0.892 2.3754 0.90093 13 11 11 13 0.8462 0.8462 1.0000 D 0 wrTTACACAAT.. kATTGCAymAy 85 18 28 14 61 89 76 53.0000 47
oligos_8nt_mkv6_m2 MA0102.2 oligos_8nt_mkv6_m2 CEBPA 0.850 0.547 3.151 0.175 0.910 1.6272 0.89978 14 9 9 14 0.6429 0.6429 1.0000 R 2 ..ATTGTGAAA... RTTGCRMAA 29 64 74 68 66 31 41 53.2857 48
oligos_8nt_mkv6_m2 MA0102.1 oligos_8nt_mkv6_m2 Cebpa 0.840 0.616 0.283 -0.189 0.922 1.7170 0.91577 14 12 11 15 0.7333 0.7857 0.9167 R -1 wkATTGTGAAA... .RBRTTGCRMAA 37 39 114 112 20 36 26 54.8571 49
positions_8nt_m5 MA0466.1 positions_8nt_m5 CEBPB 0.825 0.534 10.036 0.501 0.894 2.3324 0.90183 17 11 11 17 0.6471 0.6471 1.0000 D 3 ...GGTTGCACAAy... kATTGCAymAy 51 69 4 42 58 86 75 55.0000 50
positions_6nt_m4 MA0102.3 positions_6nt_m4 CEBPA 0.830 0.507 9.858 0.484 0.896 2.2899 0.90272 18 11 11 18 0.6111 0.6111 1.0000 D 4 ....GTTGCACAACA... aTTGCAyAAym 45 80 7 47 57 80 70 55.1429 51
positions_8nt_m1 MA0102.2 positions_8nt_m1 CEBPA 0.861 0.484 3.275 0.135 0.911 1.6004 0.90061 16 9 9 16 0.5625 0.5625 1.0000 R 4 ....ATTGCAAAA... RTTGCRMAA 23 92 70 75 62 29 37 55.4286 52
oligos_8nt_mkv6_m4 MA0078.1 oligos_8nt_mkv6_m4 Sox17 0.840 0.480 2.389 0.159 0.924 1.2107 0.90275 13 9 8 14 0.5714 0.6154 0.8889 R 5 .....CACAATah SACAATRD. 38 95 93 69 56 14 23 55.4286 53
positions_7nt_m1 MA0102.2 positions_7nt_m1 CEBPA 0.840 0.504 6.064 0.482 0.902 1.7614 0.89573 15 9 9 15 0.6000 0.6000 1.0000 D 3 ...TTTCACAAT... TtkygCAAy 36 83 56 48 75 41 55 56.2857 54
oligos_7nt_mkv5_m1 MA0078.1 oligos_7nt_mkv5_m1 Sox17 0.816 0.490 3.080 0.177 0.917 1.4992 0.90380 15 9 9 15 0.6000 0.6000 1.0000 R 6 ......CACAATcwy SACAATRDR 57 89 76 67 51 23 35 56.8571 55
positions_8nt_m2 MA0102.3 positions_8nt_m2 CEBPA 0.820 0.644 4.290 0.128 0.900 2.2040 0.90457 14 11 11 14 0.7857 0.7857 1.0000 R 1 .tGTTGAGCAAT.. KRTTRTGCAAT 54 28 63 76 48 72 58 57.0000 56
positions_8nt_m2 MA0102.2 positions_8nt_m2 CEBPA 0.835 0.537 6.397 0.520 0.896 1.8794 0.89229 14 9 9 14 0.6429 0.6429 1.0000 D 3 ...TTGAGCAAT.. TtkygCAAy 43 68 40 38 90 53 72 57.7143 57
positions_8nt_m2 MA0133.1 positions_8nt_m2 BRCA1 0.857 0.428 0.165 -0.127 0.939 0.8571 0.90648 14 7 7 14 0.5000 0.5000 1.0000 R 0 mtGTTGA....... SKGTTGK 27 103 115 102 43 5 9 57.7143 58
oligos_8nt_mkv6_m5 MA0466.1 oligos_8nt_mkv6_m5 CEBPB 0.761 0.698 9.424 0.689 0.880 2.6336 0.89568 12 11 11 12 0.9167 0.9167 1.0000 D 0 wmTTGCCCAAy. kATTGCAymAy 103 6 21 6 76 106 96 59.1429 59
positions_6nt_m2 MA0102.2 positions_6nt_m2 CEBPA 0.819 0.491 6.232 0.484 0.900 1.7927 0.89481 15 9 9 15 0.6000 0.6000 1.0000 D 3 ...TTACGCAAG... TtkygCAAy 55 88 51 46 79 44 57 60.0000 60
positions_7nt_m5 MA0102.3 positions_7nt_m5 CEBPA 0.811 0.525 9.745 0.510 0.891 2.4016 0.90038 17 11 11 17 0.6471 0.6471 1.0000 D 4 ....CTTGCACAACT.. aTTGCAyAAym 66 73 11 40 63 90 78 60.1429 61
oligos_6nt_mkv4_m1 MA0102.2 oligos_6nt_mkv4_m1 CEBPA 0.839 0.503 6.221 0.480 0.898 1.8360 0.89354 15 9 9 15 0.6000 0.6000 1.0000 D 3 ...TTGTGCAAT... TtkygCAAy 39 84 52 49 84 50 66 60.5714 62
oligos_8nt_mkv6_m4 MA0102.2 oligos_8nt_mkv6_m4 CEBPA 0.818 0.566 6.271 0.538 0.890 1.9713 0.88969 13 9 9 13 0.6923 0.6923 1.0000 D 2 ..TTACACAAT.. TtkygCAAy 56 57 46 35 96 56 80 60.8571 63
oligos_6nt_mkv4_m4 MA0035.3 oligos_6nt_mkv4_m4 Gata1 0.767 0.649 9.322 0.657 0.881 2.6251 0.89585 13 11 11 13 0.8462 0.8462 1.0000 D 2 ..TTCTTTTCTtt tyCTTATCTsy 100 24 23 13 73 104 95 61.7143 64
positions_6nt_m2 MA0102.1 positions_6nt_m2 Cebpa 0.760 0.608 6.251 0.605 0.894 2.5440 0.90601 15 12 12 15 0.8000 0.8000 1.0000 D 3 ...TTACGCAAGArw TtkygCAAyvyb 105 42 49 24 46 99 74 62.7143 65
positions_8nt_m1 MA0102.1 positions_8nt_m1 Cebpa 0.833 0.624 0.300 -0.198 0.908 2.2010 0.91258 16 12 12 16 0.7500 0.7500 1.0000 R 1 .mAGATTGCAAAA... VRBRTTGCRMAA 44 36 112 113 30 71 43 64.1429 66
positions_7nt_m1 MA0078.1 positions_7nt_m1 Sox17 0.800 0.480 3.194 0.182 0.907 1.6749 0.89832 15 9 9 15 0.6000 0.6000 1.0000 R 6 ......CACAATCwh SACAATRDR 75 94 73 65 69 33 46 65.0000 67
oligos_6nt_mkv4_m5 MA0102.2 oligos_6nt_mkv4_m5 CEBPA 0.843 0.506 2.640 0.048 0.902 1.7710 0.89544 15 9 9 15 0.6000 0.6000 1.0000 R 3 ...ATTGCACAA... RTTGCRMAA 34 81 85 86 78 42 56 66.0000 68
positions_8nt_m4 MA0102.1 positions_8nt_m4 Cebpa 0.816 0.598 0.308 -0.155 0.907 2.0389 0.90821 14 12 11 15 0.7333 0.7857 0.9167 R -1 wtATTGCCCAA... .RBRTTGCRMAA 58 48 111 105 39 60 45 66.5714 69
positions_8nt_m3 MA0102.1 positions_8nt_m3 Cebpa 0.780 0.505 6.047 0.491 0.898 2.2546 0.90348 16 12 11 17 0.6471 0.6875 0.9167 D 5 .....TTGTGCAAgad TtkygCAAyvy. 90 82 57 44 53 77 67 67.1429 70
positions_6nt_m1 MA0102.2 positions_6nt_m1 CEBPA 0.836 0.502 3.028 0.151 0.899 1.8259 0.89384 15 9 9 15 0.6000 0.6000 1.0000 R 4 ....ATTGTGAAA.. RTTGCRMAA 41 86 78 70 83 49 64 67.2857 71
oligos_7nt_mkv5_m3 MA0133.1 oligos_7nt_mkv5_m3 BRCA1 0.779 0.419 3.209 0.421 0.915 1.1961 0.88952 13 7 7 13 0.5385 0.5385 1.0000 D 6 ......ACAAtww mCAAcms 92 106 71 55 98 13 36 67.2857 72
positions_6nt_m3 MA0100.1 positions_6nt_m3 Myb 0.807 0.403 6.308 0.382 0.900 1.4050 0.88026 13 8 7 14 0.5000 0.5385 0.8750 D -1 rmAGTTG...... .rCvGTTG 70 115 43 61 107 18 59 67.5714 73
oligos_7nt_mkv5_m2 MA0151.1 oligos_7nt_mkv5_m2 ARID3A 0.820 0.410 6.330 0.335 0.888 1.3390 0.86363 12 6 6 12 0.5000 0.5000 1.0000 R 5 .....TTTAAa. TTTRAT 53 110 42 62 113 15 83 68.2857 74
oligos_7nt_mkv5_m3 MA0466.1 oligos_7nt_mkv5_m3 CEBPB 0.752 0.636 8.314 0.623 0.878 2.6796 0.89477 13 11 11 13 0.8462 0.8462 1.0000 D 0 wrTTACACAAt.. kATTGCAymAy 111 31 32 19 80 107 99 68.4286 75
oligos_8nt_mkv6_m4 MA0025.1 oligos_8nt_mkv6_m4 NFIL3 0.813 0.581 1.794 0.055 0.899 2.0269 0.89933 13 11 10 14 0.7143 0.7692 0.9091 R -1 wrTTACACAA... .YRTTACRTAA 62 52 99 83 67 59 63 69.2857 76
positions_8nt_m5 MA0102.1 positions_8nt_m5 Cebpa 0.770 0.544 6.562 0.521 0.884 2.7784 0.90178 17 12 12 17 0.7059 0.7059 1.0000 D 5 .....TTGCACAAyAwt TtkygCAAyvyb 97 65 37 37 59 111 88 70.5714 77
positions_8nt_m4 MA0102.2 positions_8nt_m4 CEBPA 0.827 0.531 2.978 0.142 0.892 1.9459 0.89040 14 9 9 14 0.6429 0.6429 1.0000 R 2 ..ATTGCCCAA... RTTGCRMAA 49 71 79 73 93 54 77 70.8571 78
oligos_6nt_mkv4_m5 MA0102.1 oligos_6nt_mkv4_m5 Cebpa 0.802 0.641 0.297 -0.164 0.903 2.3283 0.91009 15 12 12 15 0.8000 0.8000 1.0000 R 0 atGATTGCACAA... VRBRTTGCRMAA 74 29 113 108 35 85 53 71.0000 79
oligos_7nt_mkv5_m1 MA0102.2 oligos_7nt_mkv5_m1 CEBPA 0.838 0.503 2.596 0.048 0.897 1.8481 0.89319 15 9 9 15 0.6000 0.6000 1.0000 R 2 ..ATTGCACAA.... RTTGCRMAA 40 85 88 87 86 51 68 72.1429 80
positions_6nt_m1 MA0102.1 positions_6nt_m1 Cebpa 0.808 0.646 0.416 -0.221 0.899 2.4225 0.90829 15 12 12 15 0.8000 0.8000 1.0000 R 1 .wAGATTGTGAAA.. VRBRTTGCRMAA 68 27 104 115 38 93 62 72.4286 81
positions_7nt_m5 MA0466.1 positions_7nt_m5 CEBPB 0.791 0.512 9.578 0.490 0.878 2.6807 0.89475 17 11 11 17 0.6471 0.6471 1.0000 D 3 ...TCTTGCACAAC... kATTGCAymAy 79 79 18 45 81 108 100 72.8571 82
positions_8nt_m5 MA0102.2 positions_8nt_m5 CEBPA 0.814 0.431 6.536 0.408 0.883 2.1052 0.88600 17 9 9 17 0.5294 0.5294 1.0000 D 5 .....TTGCACAAy... TtkygCAAy 59 101 38 59 102 64 90 73.2857 83
oligos_7nt_mkv5_m3 MA0078.1 oligos_7nt_mkv5_m3 Sox17 0.799 0.456 1.990 0.086 0.904 1.5406 0.89029 13 9 8 14 0.5714 0.6154 0.8889 R 5 .....CACAAtww SACAATRD. 76 97 98 79 94 26 50 74.2857 84
positions_8nt_m2 MA0466.1 positions_8nt_m2 CEBPB 0.802 0.630 2.569 -0.025 0.891 2.4081 0.90025 14 11 11 14 0.7857 0.7857 1.0000 R 2 ..GTTGAGCAATm. RTKRTGCAATM 73 34 91 94 64 91 79 75.1429 85
oligos_6nt_mkv4_m4 MA0482.1 oligos_6nt_mkv4_m4 Gata4 0.757 0.541 8.941 0.551 0.872 2.5502 0.88708 13 11 10 14 0.7143 0.7692 0.9091 D 3 ...TCTTTTCTtt yCTTATCTsy. 107 67 27 32 99 100 104 76.5714 86
positions_7nt_m3 MA0102.3 positions_7nt_m3 CEBPA 0.763 0.524 8.481 0.502 0.877 2.7060 0.89426 16 11 11 16 0.6875 0.6875 1.0000 D 4 ....ATTGCGAAATr. aTTGCAyAAym 102 74 31 41 82 110 101 77.2857 87
positions_6nt_m3 MA0102.3 positions_6nt_m3 CEBPA 0.769 0.549 8.658 0.519 0.870 2.5983 0.88602 13 11 10 14 0.7143 0.7692 0.9091 D 3 ...GTTGCAAAay aTTGCAyAAy. 99 63 30 39 101 103 108 77.5714 88
positions_7nt_m2 MA0102.2 positions_7nt_m2 CEBPA 0.835 0.442 2.684 0.035 0.890 1.9717 0.88968 17 9 9 17 0.5294 0.5294 1.0000 R 4 ....ATTGCACAA.... RTTGCRMAA 42 100 83 91 97 57 81 78.7143 89
positions_6nt_m4 MA0466.1 positions_6nt_m4 CEBPB 0.788 0.482 9.601 0.453 0.872 2.8132 0.89218 18 11 11 18 0.6111 0.6111 1.0000 D 3 ...TGTTGCACAAC.... kATTGCAymAy 82 93 17 51 91 113 106 79.0000 90
positions_7nt_m2 MA0102.1 positions_7nt_m2 Cebpa 0.811 0.572 0.356 -0.184 0.894 2.5413 0.90606 17 12 12 17 0.7059 0.7059 1.0000 R 1 .mAGATTGCACAA.... VRBRTTGCRMAA 65 54 107 111 45 98 73 79.0000 91
positions_6nt_m1 MA0078.1 positions_6nt_m1 Sox17 0.761 0.456 7.347 0.462 0.880 2.1680 0.88432 15 9 9 15 0.6000 0.6000 1.0000 D 1 .wAGATTGTG..... yhyATTGTs 104 98 33 50 104 69 98 79.4286 92
positions_7nt_m4 MA0102.3 positions_7nt_m4 CEBPA 0.776 0.534 4.707 0.144 0.883 2.5672 0.89700 16 11 11 16 0.6875 0.6875 1.0000 R 1 .rATGATGCAAC.... KRTTRTGCAAT 95 70 60 72 71 101 89 79.7143 93
oligos_8nt_mkv6_m5 MA0102.2 oligos_8nt_mkv6_m5 CEBPA 0.783 0.587 3.319 0.198 0.871 2.3207 0.88031 12 9 9 12 0.7500 0.7500 1.0000 R 1 .mTTGCCCAA.. RTTGCRMAA 87 51 69 64 106 84 107 81.1429 94
oligos_8nt_mkv6_m1 MA0102.2 oligos_8nt_mkv6_m1 CEBPA 0.814 0.488 2.586 0.051 0.885 2.0671 0.88704 15 9 9 15 0.6000 0.6000 1.0000 R 3 ...GTTGCACAA... RTTGCRMAA 60 90 89 84 100 62 86 81.5714 95
oligos_7nt_mkv5_m3 MA0025.1 oligos_7nt_mkv5_m3 NFIL3 0.790 0.564 2.256 0.072 0.884 2.3104 0.89252 13 11 10 14 0.7143 0.7692 0.9091 R -1 wrTTACACAA... .YRTTACRTAA 81 59 94 80 88 82 87 81.5714 96
positions_8nt_m3 MA0038.1 positions_8nt_m3 Gfi1 0.780 0.413 0.367 -0.138 0.902 1.7607 0.89575 16 10 9 17 0.5294 0.5625 0.9000 R -1 wrTGATTGT....... .WGTGATTKR 89 109 106 103 74 40 54 82.1429 97
positions_8nt_m5 MA0078.1 positions_8nt_m5 Sox17 0.781 0.413 2.538 0.088 0.896 1.8736 0.89246 17 9 9 17 0.5294 0.5294 1.0000 R 8 ........CACAAyAwt SACAATRDR 88 108 92 78 89 52 71 82.5714 98
positions_7nt_m4 MA0466.1 positions_7nt_m4 CEBPB 0.804 0.553 1.196 -0.168 0.890 2.4246 0.89990 16 11 11 16 0.6875 0.6875 1.0000 R 2 ..ATGATGCAACC... RTKRTGCAATM 71 62 100 110 65 94 82 83.4286 99
positions_8nt_m3 MA0102.2 positions_8nt_m3 CEBPA 0.812 0.457 2.596 0.049 0.882 2.1213 0.88557 16 9 9 16 0.5625 0.5625 1.0000 R 4 ....ATTGTGCAA... RTTGCRMAA 63 96 87 85 103 65 92 84.4286 100
positions_8nt_m3 MA0078.1 positions_8nt_m3 Sox17 0.752 0.423 7.135 0.423 0.872 2.2992 0.88087 16 9 9 16 0.5625 0.5625 1.0000 D 1 .rTGATTGTG...... yhyATTGTs 113 105 34 54 105 81 105 85.2857 101
oligos_8nt_mkv6_m1 MA0102.1 oligos_8nt_mkv6_m1 Cebpa 0.770 0.616 0.329 -0.164 0.888 2.6888 0.90338 15 12 12 15 0.8000 0.8000 1.0000 R 0 atGGTTGCACAA... VRBRTTGCRMAA 98 40 110 109 54 109 84 86.2857 102
oligos_7nt_mkv5_m3 MA0102.2 oligos_7nt_mkv5_m3 CEBPA 0.756 0.523 5.976 0.496 0.863 2.4700 0.87652 13 9 9 13 0.6923 0.6923 1.0000 D 2 ..TTACACAAt.. TtkygCAAy 110 75 58 43 110 96 112 86.2857 103
oligos_7nt_mkv5_m5 MA0102.2 oligos_7nt_mkv5_m5 CEBPA 0.784 0.588 2.577 0.065 0.869 2.3504 0.87955 12 9 9 12 0.7500 0.7500 1.0000 R 1 .rTTGCTCAA.. RTTGCRMAA 86 50 90 81 108 87 109 87.2857 104
oligos_7nt_mkv5_m2 MA0497.1 oligos_7nt_mkv5_m2 MEF2C 0.751 0.601 2.167 -0.067 0.882 2.8261 0.90094 12 15 12 15 0.8000 1.0000 0.8000 R -2 wwATTTTTAAaw ..CTATTTTTRGMH. 115 46 95 99 60 114 91 88.5714 105
positions_6nt_m3 MA0102.2 positions_6nt_m3 CEBPA 0.759 0.525 4.504 0.217 0.854 2.6322 0.87253 13 9 9 13 0.6923 0.6923 1.0000 R 3 ...GTTGCAAAa. RTTGCRMAA 106 72 61 63 111 105 114 90.2857 106
positions_7nt_m5 MA0102.2 positions_7nt_m5 CEBPA 0.774 0.410 6.119 0.384 0.864 2.4485 0.87706 17 9 9 17 0.5294 0.5294 1.0000 D 5 .....TTGCACAAC... TtkygCAAy 96 111 54 60 109 95 111 90.8571 107
oligos_6nt_mkv4_m2 MA0087.1 oligos_6nt_mkv4_m2 Sox5 0.767 0.418 1.994 0.014 0.874 1.5165 0.85487 10 7 6 11 0.5455 0.6000 0.8571 R 4 ....AAACwa WAACAA. 101 107 97 93 114 24 102 91.1429 108
oligos_8nt_mkv6_m5 MA0102.1 oligos_8nt_mkv6_m5 Cebpa 0.778 0.556 0.345 -0.146 0.882 2.3669 0.89121 12 12 10 14 0.7143 0.8333 0.8333 R -2 wmTTGCCCAA.. ..BRTTGCRMAA 93 60 109 104 92 88 94 91.4286 109
oligos_7nt_mkv5_m5 MA0102.1 oligos_7nt_mkv5_m5 Cebpa 0.778 0.556 0.504 -0.105 0.880 2.4083 0.89027 12 12 10 14 0.7143 0.8333 0.8333 R -2 wrTTGCTCAA.. ..BRTTGCRMAA 94 61 102 101 95 92 97 91.7143 110
positions_7nt_m3 MA0466.1 positions_7nt_m3 CEBPB 0.757 0.520 3.051 0.047 0.873 2.7834 0.89275 16 11 11 16 0.6875 0.6875 1.0000 R 4 ....ATTGCGAAATr. RTKRTGCAATM 108 76 77 88 87 112 103 93.0000 111
oligos_7nt_mkv5_m1 MA0019.1 oligos_7nt_mkv5_m1 Ddit3::Cebpa 0.756 0.520 0.428 -0.161 0.882 2.5974 0.89640 15 12 11 16 0.6875 0.7333 0.9167 R -1 wkATTGCACAA.... .GKATTGCAYYY 109 77 103 107 72 102 93 94.7143 112
oligos_6nt_mkv4_m4 MA0037.2 oligos_6nt_mkv4_m4 GATA3 0.787 0.484 2.031 -0.076 0.859 2.2561 0.86724 13 8 8 13 0.6154 0.6154 1.0000 R 3 ...TCTTTTCT.. TYTTATCT 84 91 96 100 112 78 113 96.2857 113
positions_6nt_m4 MA0102.1 positions_6nt_m4 Cebpa 0.751 0.501 0.356 -0.161 0.869 3.1347 0.89567 18 12 12 18 0.6667 0.6667 1.0000 R 1 .vATGTTGCACAA..... VRBRTTGCRMAA 114 87 108 106 77 115 110 102.4286 114
positions_6nt_m3 MA0152.1 positions_6nt_m3 NFATC2 0.752 0.405 0.914 -0.051 0.847 2.1442 0.85208 13 7 7 13 0.5385 0.5385 1.0000 R 5 .....TGCAAAa. TGGAAAA 112 114 101 98 115 68 115 103.2857 115 
 Host name	rsat
 Job started	2014-09-03.101635
 Job done	2014-09-03.102032
 Seconds	87.88
	user	87.88
	system	4.13
	cuser	138.73
;	csystem	5.29