; convert-matrix -v 1 -i $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/positions_8nt/peak-motifs_positions-2str-noov_8nt_ci50_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/positions_8nt/peak-motifs_positions-2str-noov_8nt_ci50_pssm_count_matrices.txt ; Input files ; input /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/positions_8nt/peak-motifs_positions-2str-noov_8nt_ci50_pssm_count_matrices.tf ; Input format transfac ; Output files ; output /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.094519_2014-09-03.094519_gM9GBj/results/positions_8nt/peak-motifs_positions-2str-noov_8nt_ci50_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 173 182 485 53 502 2 2 12 3 522 456 527 540 8 217 164 c 113 162 5 27 15 3 0 2 544 6 70 25 3 483 124 121 g 134 133 23 442 22 2 2 523 5 15 2 2 7 23 44 128 t 134 77 41 32 15 547 550 17 2 11 26 0 4 40 169 141 // a 161 151 9 2 5 14 446 0 13 605 606 7 162 169 c 154 107 1 2 1 0 95 0 584 2 1 23 195 134 g 149 141 600 3 4 591 14 607 0 2 3 5 130 140 t 146 211 0 603 600 5 55 3 13 1 0 575 123 167 // a 189 178 43 19 598 4 1 25 18 1 25 643 642 19 276 169 c 144 133 14 20 13 4 1 4 12 1 594 5 0 72 133 149 g 141 180 25 586 24 1 10 600 7 642 3 0 4 416 107 167 t 174 157 566 23 13 639 636 19 611 4 26 0 2 141 132 163 // a 336 249 850 1 1 12 2 35 5 1120 1128 51 410 290 c 230 213 94 0 1 0 1126 936 1106 4 0 179 261 274 g 245 259 141 0 1 1114 0 148 5 3 0 78 192 202 t 317 407 43 1127 1125 2 0 9 12 1 0 820 265 362 // a 176 350 18 19 56 1 1 11 1 634 4 645 644 6 547 174 92 c 61 82 6 1 8 0 0 2 642 3 634 1 0 239 29 148 111 g 351 112 19 612 576 0 0 627 0 4 1 0 0 12 34 147 48 t 58 102 603 14 6 645 645 6 3 5 7 0 2 389 36 177 395 // ; Host name rsat ; Job started 2014-09-03.101110 ; Job done 2014-09-03.101110 ; Seconds 0.31 ; user 0.31 ; system 0.01 ; cuser 0 ; csystem 0