; One-to-n matrix alignment; reference matrix: positions_7nt_m2_shift0 ; 2 matrices ; sort_field=rank_mean ; positions_7nt_m2; m=0 (reference); ncol1=17; shift=0; ncol=17; rmAGATTGCACAACTyt ; Alignment reference a 94 132 260 16 314 0 0 10 2 311 7 331 333 6 35 67 73 c 71 85 4 10 5 0 0 0 330 11 318 3 0 296 15 105 76 g 95 77 9 277 13 1 2 309 1 1 1 0 0 7 2 77 54 t 74 40 61 31 2 333 332 15 1 11 8 0 1 25 282 85 131 // ; positions_7nt_m2 versus do560+do843_mmus_cebpa_liver_meme_top_m1; m=1/1; ncol2=11; w=11; offset=4; strand=D; shift=4; score= 1; ----rTTGCacMAym-- ; cor=0.869; Ncor=0.563; logoDP=9.570; NIcor=0.543; NsEucl=0.913; SSD=1.819; NSW=0.917; rcor=1; rNcor=1; rlogoDP=1; rNIcor=1; rNsEucl=1; rSSD=1; rNSW=1; rank_mean=1.000; match_rank=1 a 0 0 0 0 204 0 0 35 0 259 80 300 431 1 143 0 0 c 0 0 0 0 69 0 0 0 431 48 258 130 0 169 145 0 0 g 0 0 0 0 138 0 0 365 0 85 0 0 0 78 60 0 0 t 0 0 0 0 20 431 431 31 0 39 93 1 0 183 83 0 0 // ;