; One-to-n matrix alignment; reference matrix: positions_8nt_m3_shift0 ; 2 matrices ; sort_field=rank_mean ; positions_8nt_m3; m=0 (reference); ncol1=14; shift=0; ncol=14; wtATTGCCCAATaw ; Alignment reference a 331 246 842 1 1 12 2 34 5 1110 1118 50 412 284 c 229 210 94 0 1 0 1116 933 1097 4 0 179 259 273 g 247 258 141 0 1 1104 0 142 4 3 0 80 183 202 t 311 404 41 1117 1115 2 0 9 12 1 0 809 264 359 // ; positions_8nt_m3 versus do560+do843_mmus_cebpa_liver_meme_top_m1; m=1/1; ncol2=11; w=11; offset=2; strand=D; shift=2; score= 1; --rTTGCacMAym- ; cor=0.866; Ncor=0.680; logoDP=9.744; NIcor=0.677; NsEucl=0.919; SSD=1.582; NSW=0.928; rcor=1; rNcor=1; rlogoDP=1; rNIcor=1; rNsEucl=1; rSSD=1; rNSW=1; rank_mean=1.000; match_rank=1 a 0 0 204 0 0 35 0 259 80 300 431 1 143 0 c 0 0 69 0 0 0 431 48 258 130 0 169 145 0 g 0 0 138 0 0 365 0 85 0 0 0 78 60 0 t 0 0 20 431 431 31 0 39 93 1 0 183 83 0 // ;