; One-to-n matrix alignment; reference matrix: positions_8nt_m5_shift0 ; 2 matrices ; sort_field=rank_mean ; positions_8nt_m5; m=0 (reference); ncol1=17; shift=0; ncol=17; rwATGTTGCAATCATtw ; Alignment reference a 51 42 154 1 0 17 1 1 7 163 165 3 8 146 9 41 46 c 33 31 4 1 2 3 4 1 152 2 0 3 152 7 13 38 40 g 45 38 7 0 155 2 5 164 1 0 0 3 2 3 10 36 34 t 37 55 1 164 9 144 156 0 6 1 1 157 4 10 134 51 46 // ; positions_8nt_m5 versus do560+do843_mmus_cebpa_liver_meme_top_m1_rc; m=1/1; ncol2=11; w=11; offset=1; strand=R; shift=1; score= 1; -krTKgtGCAAy----- ; cor=0.782; Ncor=0.506; logoDP=4.619; NIcor=0.152; NsEucl=0.897; SSD=2.554; NSW=0.884; rcor=1; rNcor=1; rlogoDP=1; rNIcor=1; rNsEucl=1; rSSD=1; rNSW=1; rank_mean=1.000; match_rank=1 a 0 83 183 0 1 93 39 0 31 431 431 20 0 0 0 0 0 c 0 60 78 0 0 0 85 0 365 0 0 138 0 0 0 0 0 g 0 145 169 0 130 258 48 431 0 0 0 69 0 0 0 0 0 t 0 143 1 431 300 80 259 0 35 0 0 204 0 0 0 0 0 // ;