/home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab
 Program version       	1.118
 Input files
	file2 	$RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf
	file1 	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	alignments_1ton	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_alignments_1ton.tab
	match_table_txt	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab
	html_index   	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_index.html
	alignments_1ton_html	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_alignments_1ton.html
	match_table_html	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.html
	prefix       	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates
 Matrices
	file1	35 matrices	$RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	15	3309	dkATTGTGCAATCwt
		file1	2	10	9696	waCAAAACww
		file1	3	10	8674	hyCTGCAGrd
		file1	4	13	1339	ttTTCTTTTCTtt
		file1	5	15	2715	atGATTGCACAACwy
		file1	6	15	893	wwAGATTGTGAAAtm
		file1	7	15	669	dkATTACGCAAGArw
		file1	8	13	344	rmAGTTGCAAAay
		file1	9	18	118	wsATGTTGCACAACAGtr
		file1	10	24	6	TtTTTTyTTTTTTwAArwAAATms
		file1	11	14	4521	wkATTGCACAAywh
		...	25 more matrices
	file2	263 matrices	$RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf
		file2		1		11		26		wwyTGyGGTww
		file2		2		9		185		GCCcbrrGs
		file2		3		6		20		CACGTG
		file2		4		6		24		yGCGTG
		file2		5		22		24		hwwrGmACryyvtGTwCchrms
		file2		6		11		40		CTAGGTGTGAA
		file2		7		20		12		drvkcasygrwGcRkrrCsr
		file2		8		14		13		TGAmCTTTGmmCyt
		file2		9		12		16		bbkGrTGACGym
		file2		10		12		39		rrrTGCAATmcc
		file2		11		8		10		TTTsGCGC
		...	253 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	logoDP       	Dot product between the logo matrices.
	8	NIcor        	Normalized Pearson correlation between the information content matrices. NIcor = Icor * Wr
	9	NSW          	Normalized Sandelin-Wasserman similarity. NSW = SW/w
	10	SSD          	sum of squared distance.
	11	NsEucl       	relative Euclidian similarity. NsEucl = (max(dEucl) - dEucl)/max(dEucl)
	12	w1           	Width of the first matrix
	13	w2           	Width of the second matrix
	14	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	15	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	16	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	17	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	18	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	19	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	20	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
	21	consensus1   	IUPAC consensus of matrix 1 (dots represent non-aligned columns)
	22	consensus2   	IUPAC consensus of matrix 2 (dots represent non-aligned columns)
	23	rcor         	Matching rank for cor
	24	rNcor        	Matching rank for Ncor
	25	rlogoDP      	Matching rank for logoDP
	26	rNIcor       	Matching rank for NIcor
	27	rNsEucl      	Matching rank for NsEucl
	28	rSSD         	Matching rank for SSD
	29	rNSW         	Matching rank for NSW
	30	rank_mean    	Mean of the matching ranks on all selected metrics
	31	match_rank   	Rank of the match (sorting by rank_mean)
id1 id2 name1 name2 cor Ncor logoDP NIcor NSW SSD NsEucl w1 w2 w W Wr wr1 wr2 strand offset consensus1 consensus2 rcor rNcor rlogoDP rNIcor rNsEucl rSSD rNSW rank_mean match_rank
oligos_7nt_mkv5_m1 MA0102.3 oligos_7nt_mkv5_m1 CEBPA 0.947 0.744 10.183 0.730 0.968 0.7006 0.94620 14 11 11 14 0.7857 0.7857 1.0000 D 2 ..ATTGCACAAyw. aTTGCAyAAym 2 3 2 4 2 2 2 2.4286 1
oligos_7nt_mkv5_m1 MA0466.1 oligos_7nt_mkv5_m1 CEBPB 0.919 0.722 9.948 0.704 0.955 0.9949 0.93588 14 11 11 14 0.7857 0.7857 1.0000 D 1 .kATTGCACAAy.. kATTGCAymAy 6 7 8 7 5 8 5 6.5714 2
oligos_6nt_mkv4_m5 MA0102.3 oligos_6nt_mkv4_m5 CEBPA 0.936 0.687 9.852 0.673 0.963 0.8209 0.94176 15 11 11 15 0.7333 0.7333 1.0000 D 3 ...ATTGCACAACw. aTTGCAyAAym 3 14 10 12 4 5 4 7.4286 3
oligos_8nt_mkv6_m1 MA0102.3 oligos_8nt_mkv6_m1 CEBPA 0.905 0.664 9.835 0.645 0.947 1.1662 0.93058 15 11 11 15 0.7333 0.7333 1.0000 D 3 ...GTTGCACAATa. aTTGCAyAAym 8 19 11 18 7 15 7 12.1429 4
oligos_6nt_mkv4_m5 MA0466.1 oligos_6nt_mkv4_m5 CEBPB 0.887 0.650 9.694 0.629 0.934 1.4453 0.92272 15 11 11 15 0.7333 0.7333 1.0000 D 2 ..GATTGCACAAC.. kATTGCAymAy 10 25 15 21 12 25 13 17.2857 5
oligos_8nt_mkv6_m4 MA0043.1 oligos_8nt_mkv6_m4 HLF 0.856 0.791 6.300 0.768 0.933 1.6037 0.92538 13 12 12 13 0.9231 0.9231 1.0000 D 0 wrTTACACAATa. krTTACryAAth 28 2 49 2 8 31 15 19.2857 6
positions_8nt_m1 MA0102.3 positions_8nt_m1 CEBPA 0.888 0.610 9.440 0.600 0.938 1.3576 0.92510 16 11 11 16 0.6875 0.6875 1.0000 D 4 ....ATTGCAAAACw. aTTGCAyAAym 9 41 22 28 9 19 10 19.7143 7
positions_7nt_m2 MA0102.3 positions_7nt_m2 CEBPA 0.886 0.573 10.155 0.557 0.928 1.5913 0.91891 17 11 11 17 0.6471 0.6471 1.0000 D 4 ....ATTGCACAACT.. aTTGCAyAAym 11 55 4 31 16 29 21 23.8571 8
positions_7nt_m5 MA0102.3 positions_7nt_m5 CEBPA 0.883 0.571 10.162 0.554 0.925 1.6435 0.91759 17 11 11 17 0.6471 0.6471 1.0000 D 4 ....ATTGCACAACT.. aTTGCAyAAym 12 57 3 32 19 34 24 25.8571 9
oligos_6nt_mkv4_m1 MA0102.3 oligos_6nt_mkv4_m1 CEBPA 0.948 0.695 4.203 0.060 0.968 0.7063 0.94597 15 11 11 15 0.7333 0.7333 1.0000 R 1 .kATTGTGCAAT... KRTTRTGCAAT 1 11 72 91 3 3 3 26.2857 10
positions_7nt_m1 MA0466.1 positions_7nt_m1 CEBPB 0.862 0.632 9.285 0.609 0.924 1.6731 0.91685 15 11 11 15 0.7333 0.7333 1.0000 D 1 .tATTTCACAAT... kATTGCAymAy 21 32 28 23 20 35 25 26.2857 11
positions_7nt_m2 MA0466.1 positions_7nt_m2 CEBPB 0.875 0.566 10.062 0.546 0.922 1.7133 0.91586 17 11 11 17 0.6471 0.6471 1.0000 D 3 ...GATTGCACAAC... kATTGCAymAy 16 61 5 35 21 38 27 29.0000 12
positions_8nt_m3 MA0102.3 positions_8nt_m3 CEBPA 0.844 0.663 9.783 0.657 0.918 1.8144 0.91341 14 11 11 14 0.7857 0.7857 1.0000 D 2 ..ATTGCCCAATa. aTTGCAyAAym 36 21 12 15 31 51 38 29.1429 13
positions_8nt_m4 MA0102.3 positions_8nt_m4 CEBPA 0.872 0.564 10.262 0.542 0.922 1.7253 0.91556 17 11 11 17 0.6471 0.6471 1.0000 D 4 ....GTTGCACAAyA.. aTTGCAyAAym 17 63 1 37 23 40 29 30.0000 14
oligos_8nt_mkv6_m2 MA0102.3 oligos_8nt_mkv6_m2 CEBPA 0.879 0.691 4.255 0.147 0.937 1.3938 0.92411 14 11 11 14 0.7857 0.7857 1.0000 R 1 .kATTGTGAAAT.. KRTTRTGCAAT 13 12 71 77 10 20 11 30.5714 15
oligos_8nt_mkv6_m1 MA0466.1 oligos_8nt_mkv6_m1 CEBPB 0.857 0.629 9.666 0.600 0.919 1.7907 0.91398 15 11 11 15 0.7333 0.7333 1.0000 D 2 ..GGTTGCACAAT.. kATTGCAymAy 27 34 17 27 27 48 35 30.7143 16
oligos_8nt_mkv6_m3 MA0102.3 oligos_8nt_mkv6_m3 CEBPA 0.877 0.689 4.336 0.140 0.935 1.4197 0.92341 14 11 11 14 0.7857 0.7857 1.0000 R 1 .tATTGAGCAAT.. KRTTRTGCAAT 14 13 69 79 11 22 12 31.4286 17
positions_7nt_m1 MA0102.3 positions_7nt_m1 CEBPA 0.858 0.629 9.288 0.601 0.918 1.7985 0.91379 15 11 11 15 0.7333 0.7333 1.0000 D 2 ..ATTTCACAATC.. aTTGCAyAAym 26 33 27 26 29 49 36 32.2857 18
dyads_m1 MA0033.1 dyads_m1 FOXL1 0.924 0.462 4.378 0.472 0.978 0.3571 0.94718 16 8 8 16 0.5000 0.5000 1.0000 D 6 ......dhdhaATA.. wwdayATA 5 99 68 53 1 1 1 32.5714 19
oligos_6nt_mkv4_m1 MA0466.1 oligos_6nt_mkv4_m1 CEBPB 0.924 0.678 2.822 -0.039 0.954 1.0110 0.93536 15 11 11 15 0.7333 0.7333 1.0000 R 2 ..ATTGTGCAATC.. RTKRTGCAATM 4 17 88 105 6 9 6 33.5714 20
positions_8nt_m3 MA0466.1 positions_8nt_m3 CEBPB 0.829 0.651 9.663 0.649 0.910 1.9858 0.90941 14 11 11 14 0.7857 0.7857 1.0000 D 1 .tATTGCCCAAT.. kATTGCAymAy 52 23 18 17 38 63 44 36.4286 21
oligos_7nt_mkv5_m3 MA0043.1 oligos_7nt_mkv5_m3 HLF 0.806 0.806 6.362 0.783 0.911 2.1254 0.91409 12 12 12 12 1.0000 1.0000 1.0000 D 0 wrTTACACAAya krTTACryAAth 75 1 45 1 26 72 41 37.2857 22
positions_7nt_m5 MA0466.1 positions_7nt_m5 CEBPB 0.855 0.553 10.041 0.543 0.913 1.9135 0.91108 17 11 11 17 0.6471 0.6471 1.0000 D 3 ...CATTGCACAAC... kATTGCAymAy 29 66 6 36 35 58 40 38.5714 23
positions_7nt_m3 MA0102.2 positions_7nt_m3 CEBPA 0.914 0.514 3.780 0.178 0.940 1.0825 0.91826 16 9 9 16 0.5625 0.5625 1.0000 R 4 ....ATTGCGAAA... RTTGCRMAA 7 83 75 73 18 10 9 39.2857 24
oligos_8nt_mkv6_m3 MA0102.1 oligos_8nt_mkv6_m3 Cebpa 0.829 0.608 6.271 0.605 0.918 1.8054 0.91363 14 12 11 15 0.7333 0.7857 0.9167 D 3 ...TTGAGCAATaw TtkygCAAyvy. 51 43 52 25 30 50 37 41.1429 25
oligos_8nt_mkv6_m3 MA0466.1 oligos_8nt_mkv6_m3 CEBPB 0.872 0.685 2.615 -0.034 0.933 1.4728 0.92199 14 11 11 14 0.7857 0.7857 1.0000 R 2 ..ATTGAGCAATa. RTKRTGCAATM 18 16 96 103 14 26 16 41.2857 26
oligos_8nt_mkv6_m4 MA0102.3 oligos_8nt_mkv6_m4 CEBPA 0.810 0.686 9.050 0.681 0.905 2.0833 0.90722 13 11 11 13 0.8462 0.8462 1.0000 D 1 .rTTACACAATa. aTTGCAyAAym 71 15 29 11 44 70 53 41.8571 27
oligos_7nt_mkv5_m3 MA0102.3 oligos_7nt_mkv5_m3 CEBPA 0.806 0.738 9.392 0.733 0.902 2.1661 0.90539 12 11 11 12 0.9167 0.9167 1.0000 D 1 .rTTACACAAya aTTGCAyAAym 76 4 24 3 52 77 59 42.1429 28
oligos_6nt_mkv4_m1 MA0078.1 oligos_6nt_mkv4_m1 Sox17 0.861 0.431 6.883 0.426 0.932 1.0892 0.90775 15 9 8 16 0.5000 0.5333 0.8889 D -1 dkATTGTG....... .hyATTGTs 24 106 39 58 42 11 17 42.4286 29
oligos_7nt_mkv5_m5 MA0102.3 oligos_7nt_mkv5_m5 CEBPA 0.803 0.736 9.718 0.722 0.900 2.2078 0.90448 12 11 11 12 0.9167 0.9167 1.0000 D 1 .rTTGCTCAAya aTTGCAyAAym 78 5 14 5 53 81 63 42.7143 30
oligos_8nt_mkv6_m2 MA0466.1 oligos_8nt_mkv6_m2 CEBPB 0.860 0.676 2.841 0.043 0.927 1.6056 0.91855 14 11 11 14 0.7857 0.7857 1.0000 R 2 ..ATTGTGAAATa. RTKRTGCAATM 25 18 87 97 17 32 23 42.7143 31
oligos_8nt_mkv6_m2 MA0078.1 oligos_8nt_mkv6_m2 Sox17 0.852 0.454 6.708 0.449 0.929 1.1436 0.90548 14 9 8 15 0.5333 0.5714 0.8889 D -1 wkATTGTG...... .hyATTGTs 31 102 40 57 51 14 20 45.0000 32
positions_7nt_m1 MA0102.1 positions_7nt_m1 Cebpa 0.813 0.650 6.099 0.632 0.911 2.1382 0.91384 15 12 12 15 0.8000 0.8000 1.0000 D 3 ...TTTCACAATCwy TtkygCAAyvyb 65 24 61 19 28 75 43 45.0000 33
oligos_8nt_mkv6_m5 MA0102.3 oligos_8nt_mkv6_m5 CEBPA 0.797 0.731 9.686 0.721 0.898 2.2365 0.90387 12 11 11 12 0.9167 0.9167 1.0000 D 1 .aTTGCCCAAya aTTGCAyAAym 83 6 16 6 55 83 67 45.1429 34
positions_8nt_m2 MA0466.1 positions_8nt_m2 CEBPB 0.871 0.599 2.668 -0.037 0.930 1.5364 0.92032 16 11 11 16 0.6875 0.6875 1.0000 R 4 ....ATTGTGCAAga. RTKRTGCAATM 20 47 92 104 15 28 18 46.2857 35
oligos_6nt_mkv4_m1 MA0102.1 oligos_6nt_mkv4_m1 Cebpa 0.811 0.649 6.237 0.631 0.909 2.1939 0.91272 15 12 12 15 0.8000 0.8000 1.0000 D 3 ...TTGTGCAATCwt TtkygCAAyvyb 68 27 57 20 33 79 46 47.1429 36
oligos_6nt_mkv4_m5 MA0133.1 oligos_6nt_mkv4_m5 BRCA1 0.871 0.406 3.115 0.410 0.943 0.7921 0.91010 15 7 7 15 0.4667 0.4667 1.0000 D 8 ........ACAACwy mCAAcms 19 120 83 63 36 4 8 47.5714 37
positions_8nt_m1 MA0466.1 positions_8nt_m1 CEBPB 0.828 0.569 9.326 0.559 0.903 2.1275 0.90624 16 11 11 16 0.6875 0.6875 1.0000 D 3 ...GATTGCAAAAC.. kATTGCAymAy 53 58 25 30 45 74 54 48.4286 38
oligos_8nt_mkv6_m4 MA0102.1 oligos_8nt_mkv6_m4 Cebpa 0.807 0.634 6.278 0.610 0.906 2.0607 0.90772 13 12 11 14 0.7857 0.8462 0.9167 D 2 ..TTACACAATah TtkygCAAyvy. 73 31 50 22 43 69 52 48.5714 39
positions_8nt_m2 MA0102.3 positions_8nt_m2 CEBPA 0.862 0.593 4.265 0.040 0.919 1.7745 0.91437 16 11 11 16 0.6875 0.6875 1.0000 R 3 ...GATTGTGCAAg.. KRTTRTGCAAT 22 49 70 98 25 46 34 49.1429 40
positions_7nt_m3 MA0102.1 positions_7nt_m3 Cebpa 0.876 0.657 0.379 -0.211 0.927 1.7478 0.92210 16 12 12 16 0.7500 0.7500 1.0000 R 1 .rAGATTGCGAAA... VRBRTTGCRMAA 15 22 112 123 13 42 22 49.8571 41
dyads_m3 MA0019.1 dyads_m3 Ddit3::Cebpa 0.778 0.648 7.559 0.663 0.903 1.9363 0.90160 10 12 10 12 0.8333 1.0000 0.8333 D 0 wdTTGCAAhw rrrTGCAATm.. 98 28 35 13 62 59 55 50.0000 42
positions_6nt_m1 MA0102.3 positions_6nt_m1 CEBPA 0.845 0.619 4.056 0.122 0.916 1.8400 0.91280 15 11 11 15 0.7333 0.7333 1.0000 R 3 ...GATTGTGAAAt. KRTTRTGCAAT 35 37 74 82 32 54 39 50.4286 43
positions_6nt_m1 MA0466.1 positions_6nt_m1 CEBPB 0.845 0.620 2.705 0.034 0.921 1.7472 0.91503 15 11 11 15 0.7333 0.7333 1.0000 R 4 ....ATTGTGAAAtm RTKRTGCAATM 34 36 91 100 24 41 31 51.0000 44
oligos_8nt_mkv6_m3 MA0102.2 oligos_8nt_mkv6_m3 CEBPA 0.843 0.542 6.270 0.533 0.907 1.6801 0.89816 14 9 9 14 0.6429 0.6429 1.0000 D 3 ...TTGAGCAAT.. TtkygCAAy 38 72 53 39 74 37 51 52.0000 45
oligos_7nt_mkv5_m1 MA0133.1 oligos_7nt_mkv5_m1 BRCA1 0.841 0.421 3.257 0.425 0.934 0.9204 0.90309 14 7 7 14 0.5000 0.5000 1.0000 D 7 .......ACAAywh mCAAcms 40 113 80 59 57 6 14 52.7143 46
oligos_7nt_mkv5_m4 MA0084.1 oligos_7nt_mkv5_m4 SRY 0.847 0.424 6.343 0.414 0.920 1.1155 0.89331 12 9 7 14 0.5000 0.5833 0.7778 D -2 aaACAAA..... ..waACAAw 33 109 46 62 90 12 32 54.8571 47
oligos_8nt_mkv6_m1 MA0078.1 oligos_8nt_mkv6_m1 Sox17 0.854 0.427 2.638 0.134 0.929 1.1397 0.90564 15 9 8 16 0.5000 0.5333 0.8889 R 7 .......CACAATah SACAATRD. 30 107 94 81 48 13 19 56.0000 48
oligos_8nt_mkv6_m4 MA0466.1 oligos_8nt_mkv6_m4 CEBPB 0.784 0.663 8.817 0.653 0.892 2.3734 0.90097 13 11 11 13 0.8462 0.8462 1.0000 D 0 wrTTACACAAT.. kATTGCAymAy 88 20 32 16 64 94 79 56.1429 49
oligos_7nt_mkv5_m5 MA0466.1 oligos_7nt_mkv5_m5 CEBPB 0.780 0.715 9.502 0.692 0.888 2.4748 0.89887 12 11 11 12 0.9167 0.9167 1.0000 D 0 wrTTGCTCAAy. kATTGCAymAy 93 8 21 8 72 103 89 56.2857 50
oligos_8nt_mkv6_m2 MA0102.2 oligos_8nt_mkv6_m2 CEBPA 0.850 0.547 3.146 0.175 0.910 1.6253 0.89984 14 9 9 14 0.6429 0.6429 1.0000 R 2 ..ATTGTGAAA... RTTGCRMAA 32 70 82 74 69 33 45 57.8571 51
positions_6nt_m4 MA0102.3 positions_6nt_m4 CEBPA 0.830 0.507 9.852 0.484 0.896 2.2850 0.90283 18 11 11 18 0.6111 0.6111 1.0000 D 4 ....GTTGCACAACA... aTTGCAyAAym 49 85 9 50 58 87 73 58.7143 52
oligos_8nt_mkv6_m2 MA0102.1 oligos_8nt_mkv6_m2 Cebpa 0.840 0.616 0.284 -0.189 0.922 1.7150 0.91582 14 12 11 15 0.7333 0.7857 0.9167 R -1 wkATTGTGAAA... .RBRTTGCRMAA 42 39 121 120 22 39 28 58.7143 53
positions_8nt_m4 MA0466.1 positions_8nt_m4 CEBPB 0.825 0.534 10.032 0.501 0.894 2.3341 0.90179 17 11 11 17 0.6471 0.6471 1.0000 D 3 ...GGTTGCACAAy... kATTGCAymAy 55 75 7 46 61 91 77 58.8571 54
positions_8nt_m1 MA0102.2 positions_8nt_m1 CEBPA 0.861 0.484 3.266 0.135 0.911 1.5957 0.90075 16 9 9 16 0.5625 0.5625 1.0000 R 4 ....ATTGCAAAA... RTTGCRMAA 23 95 79 80 65 30 42 59.1429 55
positions_7nt_m1 MA0102.2 positions_7nt_m1 CEBPA 0.841 0.504 6.083 0.482 0.902 1.7601 0.89576 15 9 9 15 0.6000 0.6000 1.0000 D 3 ...TTTCACAAT... TtkygCAAy 41 88 62 51 79 43 57 60.1429 56
oligos_8nt_mkv6_m4 MA0078.1 oligos_8nt_mkv6_m4 Sox17 0.837 0.479 2.335 0.155 0.923 1.2264 0.90212 13 9 8 14 0.5714 0.6154 0.8889 R 5 .....CACAATah SACAATRD. 45 98 101 75 59 17 26 60.1429 57
oligos_7nt_mkv5_m3 MA0466.1 oligos_7nt_mkv5_m3 CEBPB 0.769 0.705 9.034 0.691 0.883 2.5668 0.89701 12 11 11 12 0.9167 0.9167 1.0000 D 0 wrTTACACAAy. kATTGCAymAy 106 9 30 9 76 109 93 61.7143 58
oligos_8nt_mkv6_m5 MA0466.1 oligos_8nt_mkv6_m5 CEBPB 0.762 0.698 9.425 0.689 0.881 2.6281 0.89579 12 11 11 12 0.9167 0.9167 1.0000 D 0 waTTGCCCAAy. kATTGCAymAy 110 10 23 10 78 113 100 63.4286 59
positions_6nt_m2 MA0102.2 positions_6nt_m2 CEBPA 0.819 0.492 6.241 0.485 0.901 1.7890 0.89491 15 9 9 15 0.6000 0.6000 1.0000 D 3 ...TTACGCAAG... TtkygCAAy 59 93 55 49 84 47 61 64.0000 60
positions_7nt_m4 MA0102.3 positions_7nt_m4 CEBPA 0.811 0.525 9.742 0.510 0.891 2.4036 0.90034 17 11 11 17 0.6471 0.6471 1.0000 D 4 ....CTTGCACAACT.. aTTGCAyAAym 70 79 13 44 67 96 82 64.4286 61
oligos_6nt_mkv4_m1 MA0102.2 oligos_6nt_mkv4_m1 CEBPA 0.839 0.503 6.225 0.480 0.898 1.8366 0.89352 15 9 9 15 0.6000 0.6000 1.0000 D 3 ...TTGTGCAAT... TtkygCAAy 43 89 58 52 88 53 70 64.7143 62
oligos_8nt_mkv6_m4 MA0102.2 oligos_8nt_mkv6_m4 CEBPA 0.817 0.566 6.276 0.537 0.891 1.9698 0.88973 13 9 9 13 0.6923 0.6923 1.0000 D 2 ..TTACACAAT.. TtkygCAAy 60 62 51 38 98 61 83 64.7143 63
oligos_6nt_mkv4_m4 MA0035.3 oligos_6nt_mkv4_m4 Gata1 0.767 0.649 9.313 0.658 0.881 2.6116 0.89612 13 11 11 13 0.8462 0.8462 1.0000 D 2 ..TTCTTTTCTtt tyCTTATCTsy 107 26 26 14 77 111 99 65.7143 64
positions_6nt_m2 MA0102.1 positions_6nt_m2 Cebpa 0.760 0.608 6.260 0.606 0.894 2.5430 0.90603 15 12 12 15 0.8000 0.8000 1.0000 D 3 ...TTACGCAAGArw TtkygCAAyvyb 113 42 54 24 47 106 75 65.8571 65
dyads_m1 MA0102.2 dyads_m1 CEBPA 0.750 0.422 3.504 0.385 0.920 1.4448 0.90556 16 9 9 16 0.5625 0.5625 1.0000 D 4 ....TtdhdhaAT... TtkygCAAy 124 111 76 65 50 24 33 69.0000 66
positions_8nt_m1 MA0102.1 positions_8nt_m1 Cebpa 0.833 0.625 0.301 -0.199 0.908 2.1998 0.91260 16 12 12 16 0.7500 0.7500 1.0000 R 1 .mAGATTGCAAAA... VRBRTTGCRMAA 48 35 118 122 34 80 47 69.1429 67
positions_7nt_m1 MA0078.1 positions_7nt_m1 Sox17 0.800 0.480 3.198 0.181 0.907 1.6732 0.89837 15 9 9 15 0.6000 0.6000 1.0000 R 6 ......CACAATCwy SACAATRDR 80 97 81 72 73 36 49 69.7143 68
oligos_7nt_mkv5_m1 MA0102.1 oligos_7nt_mkv5_m1 Cebpa 0.824 0.604 0.206 -0.158 0.907 2.0400 0.90819 14 12 11 15 0.7333 0.7857 0.9167 R -1 wkATTGCACAA... .RBRTTGCRMAA 56 44 123 115 40 67 48 70.4286 69
oligos_6nt_mkv4_m5 MA0102.2 oligos_6nt_mkv4_m5 CEBPA 0.843 0.506 2.643 0.048 0.902 1.7724 0.89540 15 9 9 15 0.6000 0.6000 1.0000 R 3 ...ATTGCACAA... RTTGCRMAA 37 86 93 95 82 45 60 71.1429 70
positions_8nt_m3 MA0102.1 positions_8nt_m3 Cebpa 0.815 0.598 0.310 -0.156 0.907 2.0482 0.90800 14 12 11 15 0.7333 0.7857 0.9167 R -1 wtATTGCCCAA... .RBRTTGCRMAA 61 48 117 114 41 68 50 71.2857 71
positions_8nt_m2 MA0102.1 positions_8nt_m2 Cebpa 0.780 0.505 6.062 0.491 0.898 2.2533 0.90351 16 12 11 17 0.6471 0.6875 0.9167 D 5 .....TTGTGCAAgad TtkygCAAyvy. 92 87 63 47 56 85 71 71.5714 72
positions_6nt_m1 MA0102.2 positions_6nt_m1 CEBPA 0.835 0.501 3.041 0.152 0.898 1.8277 0.89378 15 9 9 15 0.6000 0.6000 1.0000 R 4 ....ATTGTGAAA.. RTTGCRMAA 46 90 85 76 87 52 66 71.7143 73
positions_6nt_m3 MA0100.1 positions_6nt_m3 Myb 0.807 0.404 6.306 0.383 0.900 1.3993 0.88051 13 8 7 14 0.5000 0.5385 0.8750 D -1 rmAGTTG...... .rCvGTTG 72 123 48 67 111 21 62 72.0000 74
oligos_8nt_mkv6_m1 MA0102.2 oligos_8nt_mkv6_m1 CEBPA 0.819 0.492 6.238 0.466 0.888 2.0117 0.88856 15 9 9 15 0.6000 0.6000 1.0000 D 4 ....TTGCACAAT.. TtkygCAAy 58 92 56 54 101 64 88 73.2857 75
oligos_7nt_mkv5_m2 MA0151.1 oligos_7nt_mkv5_m2 ARID3A 0.821 0.410 6.324 0.335 0.889 1.3341 0.86388 12 6 6 12 0.5000 0.5000 1.0000 R 5 .....TTTAAa. TTTRAT 57 117 47 69 122 18 87 73.8571 76
oligos_8nt_mkv6_m4 MA0025.1 oligos_8nt_mkv6_m4 NFIL3 0.812 0.580 1.804 0.055 0.898 2.0395 0.89902 13 11 10 14 0.7143 0.7692 0.9091 R -1 wrTTACACAA... .YRTTACRTAA 67 53 108 92 70 66 69 75.0000 77
positions_8nt_m4 MA0102.1 positions_8nt_m4 Cebpa 0.771 0.544 6.562 0.521 0.885 2.7709 0.90191 17 12 12 17 0.7059 0.7059 1.0000 D 5 .....TTGCACAAyAwt TtkygCAAyvyb 103 71 41 42 60 117 92 75.1429 78
oligos_6nt_mkv4_m5 MA0102.1 oligos_6nt_mkv4_m5 Cebpa 0.802 0.641 0.296 -0.164 0.903 2.3292 0.91007 15 12 12 15 0.8000 0.8000 1.0000 R 0 atGATTGCACAA... VRBRTTGCRMAA 79 30 119 117 37 90 56 75.4286 79
oligos_7nt_mkv5_m3 MA0442.1 oligos_7nt_mkv5_m3 SOX10 0.842 0.421 0.061 -0.129 0.921 0.9481 0.88525 12 6 6 12 0.5000 0.5000 1.0000 R 6 ......ACAAya ACAAWG 39 112 124 111 107 7 30 75.7143 80
positions_8nt_m3 MA0102.2 positions_8nt_m3 CEBPA 0.826 0.531 2.985 0.143 0.891 1.9562 0.89011 14 9 9 14 0.6429 0.6429 1.0000 R 2 ..ATTGCCCAA... RTTGCRMAA 54 76 86 78 97 60 80 75.8571 81
oligos_7nt_mkv5_m1 MA0102.2 oligos_7nt_mkv5_m1 CEBPA 0.838 0.539 2.636 0.051 0.894 1.9096 0.89143 14 9 9 14 0.6429 0.6429 1.0000 R 2 ..ATTGCACAA... RTTGCRMAA 44 74 95 93 94 57 76 76.1429 82
positions_7nt_m4 MA0466.1 positions_7nt_m4 CEBPB 0.791 0.512 9.574 0.490 0.878 2.6765 0.89483 17 11 11 17 0.6471 0.6471 1.0000 D 3 ...TCTTGCACAAC... kATTGCAymAy 84 84 20 48 85 115 103 77.0000 83
positions_6nt_m1 MA0102.1 positions_6nt_m1 Cebpa 0.807 0.646 0.416 -0.221 0.899 2.4276 0.90819 15 12 12 15 0.8000 0.8000 1.0000 R 1 .wAGATTGTGAAA.. VRBRTTGCRMAA 74 29 111 124 39 100 65 77.4286 84
dyads_m3 MA0133.1 dyads_m3 BRCA1 0.779 0.425 3.282 0.420 0.899 1.2122 0.87025 10 7 6 11 0.5455 0.6000 0.8571 D 4 ....GCAAhw mCAAcm. 95 108 78 61 120 16 64 77.4286 85
positions_8nt_m4 MA0102.2 positions_8nt_m4 CEBPA 0.815 0.431 6.536 0.408 0.883 2.1013 0.88611 17 9 9 17 0.5294 0.5294 1.0000 D 5 .....TTGCACAAy... TtkygCAAy 62 105 42 64 105 71 94 77.5714 86
oligos_8nt_mkv6_m1 MA0043.1 oligos_8nt_mkv6_m1 HLF 0.753 0.602 6.217 0.584 0.877 2.9417 0.89893 15 12 12 15 0.8000 0.8000 1.0000 D 2 ..GGTTGCACAATa. krTTACryAAth 119 45 59 29 71 121 104 78.2857 87
dyads_m3 MA0102.3 dyads_m3 CEBPA 0.756 0.567 7.319 0.532 0.876 2.2328 0.88260 10 11 9 12 0.7500 0.9000 0.8182 D 1 .dTTGCAAhw aTTGCAyAA.. 117 60 37 40 109 82 107 78.8571 88
positions_8nt_m5 MA0102.3 positions_8nt_m5 CEBPA 0.798 0.516 4.406 0.116 0.891 2.4009 0.90040 17 11 11 17 0.6471 0.6471 1.0000 R 1 .wATGTTGCAAT..... KRTTRTGCAAT 82 82 67 84 66 95 81 79.5714 89
oligos_7nt_mkv5_m3 MA0102.2 oligos_7nt_mkv5_m3 CEBPA 0.775 0.581 6.445 0.550 0.866 2.4081 0.87808 12 9 9 12 0.7500 0.7500 1.0000 D 2 ..TTACACAAy. TtkygCAAy 99 52 44 34 116 98 119 80.2857 90
oligos_7nt_mkv5_m3 MA0102.1 oligos_7nt_mkv5_m3 Cebpa 0.770 0.550 6.445 0.526 0.877 2.4515 0.88929 12 12 10 14 0.7143 0.8333 0.8333 D 2 ..TTACACAAya TtkygCAAyv.. 104 68 43 41 100 102 105 80.4286 91
oligos_6nt_mkv4_m4 MA0482.1 oligos_6nt_mkv4_m4 Gata4 0.757 0.541 8.933 0.552 0.873 2.5460 0.88717 13 11 10 14 0.7143 0.7692 0.9091 D 3 ...TCTTTTCTtt yCTTATCTsy. 116 73 31 33 103 107 111 82.0000 92
oligos_7nt_mkv5_m3 MA0025.1 oligos_7nt_mkv5_m3 NFIL3 0.798 0.614 2.419 0.080 0.886 2.2736 0.89338 12 11 10 13 0.7692 0.8333 0.9091 R -1 wrTTACACAA.. .YRTTACRTAA 81 40 100 88 89 86 91 82.1429 93
positions_7nt_m3 MA0102.3 positions_7nt_m3 CEBPA 0.763 0.524 8.483 0.503 0.877 2.7032 0.89431 16 11 11 16 0.6875 0.6875 1.0000 D 4 ....ATTGCGAAATr. aTTGCAyAAym 109 80 34 45 86 116 106 82.2857 94
oligos_7nt_mkv5_m3 MA0078.1 oligos_7nt_mkv5_m3 Sox17 0.814 0.407 2.071 0.097 0.898 1.4274 0.87931 12 9 7 14 0.5000 0.5833 0.7778 R 5 .....CACAAya SACAATR.. 63 119 105 86 114 23 68 82.5714 95
positions_6nt_m3 MA0102.3 positions_6nt_m3 CEBPA 0.770 0.550 8.677 0.520 0.870 2.5901 0.88620 13 11 10 14 0.7143 0.7692 0.9091 D 3 ...GTTGCAAAay aTTGCAyAAy. 105 69 33 43 104 110 115 82.7143 96
positions_6nt_m4 MA0466.1 positions_6nt_m4 CEBPB 0.788 0.482 9.597 0.452 0.872 2.8190 0.89207 18 11 11 18 0.6111 0.6111 1.0000 D 3 ...TGTTGCACAAC.... kATTGCAymAy 85 96 19 56 93 120 113 83.1429 97
positions_7nt_m2 MA0102.1 positions_7nt_m2 Cebpa 0.811 0.572 0.356 -0.184 0.894 2.5403 0.90608 17 12 12 17 0.7059 0.7059 1.0000 R 1 .mAGATTGCACAA.... VRBRTTGCRMAA 69 56 115 119 46 105 74 83.4286 98
positions_7nt_m2 MA0102.2 positions_7nt_m2 CEBPA 0.835 0.442 2.716 0.036 0.890 1.9721 0.88967 17 9 9 17 0.5294 0.5294 1.0000 R 4 ....ATTGCACAA.... RTTGCRMAA 47 103 90 99 99 62 85 83.5714 99
positions_6nt_m1 MA0078.1 positions_6nt_m1 Sox17 0.760 0.456 7.372 0.461 0.879 2.1790 0.88402 15 9 9 15 0.6000 0.6000 1.0000 D 1 .wAGATTGTG..... yhyATTGTs 114 101 36 55 108 78 102 84.8571 100
positions_7nt_m5 MA0102.2 positions_7nt_m5 CEBPA 0.829 0.439 2.792 0.031 0.887 2.0287 0.88810 17 9 9 17 0.5294 0.5294 1.0000 R 4 ....ATTGCACAA.... RTTGCRMAA 50 104 89 101 102 65 90 85.8571 101
positions_8nt_m5 MA0466.1 positions_8nt_m5 CEBPB 0.814 0.526 2.312 -0.065 0.891 2.4087 0.90023 17 11 11 17 0.6471 0.6471 1.0000 R 2 ..ATGTTGCAATC.... RTKRTGCAATM 64 77 102 107 68 99 84 85.8571 102
oligos_8nt_mkv6_m5 MA0102.2 oligos_8nt_mkv6_m5 CEBPA 0.783 0.588 3.321 0.198 0.871 2.3186 0.88037 12 9 9 12 0.7500 0.7500 1.0000 R 1 .aTTGCCCAA.. RTTGCRMAA 89 51 77 71 112 89 114 86.1429 103
positions_8nt_m4 MA0078.1 positions_8nt_m4 Sox17 0.781 0.414 2.538 0.089 0.896 1.8690 0.89259 17 9 9 17 0.5294 0.5294 1.0000 R 8 ........CACAAyAwt SACAATRDR 91 115 99 87 92 55 72 87.2857 104
dyads_m2 MA0042.1 dyads_m2 FOXI1 0.783 0.553 4.476 0.115 0.874 3.0196 0.89760 17 12 12 17 0.7059 0.7059 1.0000 R 5 .....AAATAAATAAAw AWAYAAAYAHSM 90 67 66 85 75 122 108 87.5714 105
positions_7nt_m5 MA0102.1 positions_7nt_m5 Cebpa 0.805 0.568 0.267 -0.193 0.893 2.5650 0.90563 17 12 12 17 0.7059 0.7059 1.0000 R 1 .mACATTGCACAA.... VRBRTTGCRMAA 77 59 122 121 49 108 78 87.7143 106
positions_8nt_m2 MA0038.1 positions_8nt_m2 Gfi1 0.779 0.413 0.367 -0.139 0.902 1.7700 0.89547 16 10 9 17 0.5294 0.5625 0.9000 R -1 wrTGATTGT....... .WGTGATTKR 94 116 113 112 81 44 58 88.2857 107
dyads_m4 MA0042.1 dyads_m4 FOXI1 0.772 0.579 4.114 0.117 0.869 3.1464 0.89548 16 12 12 16 0.7500 0.7500 1.0000 R 3 ...AAATAAATAAAw. AWAYAAAYAHSM 101 54 73 83 80 123 117 90.1429 108
oligos_8nt_mkv6_m1 MA0102.1 oligos_8nt_mkv6_m1 Cebpa 0.771 0.617 0.293 -0.165 0.889 2.6546 0.90399 15 12 12 15 0.8000 0.8000 1.0000 R 0 atGGTTGCACAA... VRBRTTGCRMAA 102 38 120 118 54 114 86 90.2857 109
positions_8nt_m2 MA0102.2 positions_8nt_m2 CEBPA 0.812 0.457 2.608 0.048 0.882 2.1258 0.88545 16 9 9 16 0.5625 0.5625 1.0000 R 4 ....ATTGTGCAA... RTTGCRMAA 66 100 97 94 106 73 97 90.4286 110
positions_8nt_m2 MA0078.1 positions_8nt_m2 Sox17 0.752 0.423 7.158 0.424 0.872 2.2955 0.88096 16 9 9 16 0.5625 0.5625 1.0000 D 1 .rTGATTGTG...... yhyATTGTs 121 110 38 60 110 88 112 91.2857 111
oligos_7nt_mkv5_m5 MA0102.2 oligos_7nt_mkv5_m5 CEBPA 0.784 0.588 2.577 0.065 0.870 2.3488 0.87959 12 9 9 12 0.7500 0.7500 1.0000 R 1 .rTTGCTCAA.. RTTGCRMAA 87 50 98 90 113 92 116 92.2857 112
oligos_7nt_mkv5_m2 MA0497.1 oligos_7nt_mkv5_m2 MEF2C 0.752 0.601 2.162 -0.067 0.883 2.8171 0.90110 12 15 12 15 0.8000 1.0000 0.8000 R -2 wwATTTTTAAaw ..CTATTTTTRGMH. 122 46 103 108 63 119 96 93.8571 113
oligos_8nt_mkv6_m5 MA0102.1 oligos_8nt_mkv6_m5 Cebpa 0.778 0.556 0.345 -0.146 0.882 2.3644 0.89127 12 12 10 14 0.7143 0.8333 0.8333 R -2 waTTGCCCAA.. ..BRTTGCRMAA 96 64 116 113 95 93 98 96.4286 114
oligos_7nt_mkv5_m5 MA0102.1 oligos_7nt_mkv5_m5 Cebpa 0.778 0.556 0.504 -0.105 0.880 2.4072 0.89029 12 12 10 14 0.7143 0.8333 0.8333 R -2 wrTTGCTCAA.. ..BRTTGCRMAA 97 65 110 110 96 97 101 96.5714 115
positions_6nt_m3 MA0102.2 positions_6nt_m3 CEBPA 0.760 0.526 4.503 0.216 0.854 2.6266 0.87267 13 9 9 13 0.6923 0.6923 1.0000 R 3 ...GTTGCAAAa. RTTGCRMAA 112 78 65 70 119 112 123 97.0000 116
positions_7nt_m4 MA0102.2 positions_7nt_m4 CEBPA 0.774 0.410 6.117 0.384 0.864 2.4461 0.87712 17 9 9 17 0.5294 0.5294 1.0000 D 5 .....TTGCACAAC... TtkygCAAy 100 118 60 66 117 101 120 97.4286 117
oligos_6nt_mkv4_m2 MA0087.1 oligos_6nt_mkv4_m2 Sox5 0.766 0.418 1.994 0.014 0.874 1.5178 0.85481 10 7 6 11 0.5455 0.6000 0.8571 R 4 ....AAACww WAACAA. 108 114 107 102 123 27 109 98.5714 118
oligos_7nt_mkv5_m1 MA0078.1 oligos_7nt_mkv5_m1 Sox17 0.758 0.405 2.129 0.068 0.883 1.8759 0.87894 14 9 8 15 0.5333 0.5714 0.8889 R 6 ......CACAAywh SACAATRD. 115 122 104 89 115 56 95 99.4286 119
positions_7nt_m3 MA0466.1 positions_7nt_m3 CEBPB 0.756 0.520 3.051 0.047 0.873 2.7877 0.89267 16 11 11 16 0.6875 0.6875 1.0000 R 4 ....ATTGCGAAATr. RTKRTGCAATM 118 81 84 96 91 118 110 99.7143 120
positions_8nt_m5 MA0102.2 positions_8nt_m5 CEBPA 0.761 0.403 5.949 0.375 0.861 2.4967 0.87586 17 9 9 17 0.5294 0.5294 1.0000 D 3 ...TGTTGCAAT..... TtkygCAAy 111 124 64 68 118 104 121 101.4286 121
oligos_6nt_mkv4_m4 MA0037.2 oligos_6nt_mkv4_m4 GATA3 0.787 0.484 2.035 -0.076 0.859 2.2525 0.86734 13 8 8 13 0.6154 0.6154 1.0000 R 3 ...TCTTTTCT.. TYTTATCT 86 94 106 109 121 84 122 103.1429 122
positions_6nt_m4 MA0102.1 positions_6nt_m4 Cebpa 0.751 0.500 0.359 -0.161 0.869 3.1516 0.89539 18 12 12 18 0.6667 0.6667 1.0000 R 1 .sATGTTGCACAA..... VRBRTTGCRMAA 123 91 114 116 83 124 118 109.8571 123
positions_6nt_m3 MA0152.1 positions_6nt_m3 NFATC2 0.752 0.405 0.918 -0.050 0.847 2.1413 0.85218 13 7 7 13 0.5385 0.5385 1.0000 R 5 .....TGCAAAa. TGGAAAA 120 121 109 106 124 76 124 111.4286 124 
 Host name	rsat
 Job started	2014-09-03.190147
 Job done	2014-09-03.190552
 Seconds	96.74
	user	96.74
	system	4.26
	cuser	138.69
;	csystem	4.67