; convert-matrix -v 1 -i $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt ; Input files ; input /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf ; Input format transfac ; Output files ; output /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 3310 3022 0 9626 0 1996 2451 2724 2823 3484 4759 9626 0 9626 3102 3127 c 1582 1807 0 0 0 1020 1192 2568 1511 2499 1851 0 0 0 1695 1607 g 1607 1695 0 0 0 1851 2499 1511 2568 1192 1020 0 0 0 1807 1582 t 3127 3102 9626 0 9626 4759 3484 2823 2724 2451 1996 0 9626 0 3022 3310 // a 169 428 683 502 27 709 718 719 19 722 721 719 5 714 717 592 306 c 112 46 25 9 9 3 3 1 2 1 1 1 6 1 0 22 54 g 29 179 5 25 3 5 2 4 4 0 2 3 0 5 3 52 41 t 415 72 12 189 686 8 2 1 700 2 1 2 714 5 5 59 324 // a 3278 3895 0 0 0 0 12984 12984 4097 5695 c 1633 1516 0 0 0 12984 0 0 3476 2378 g 2378 3476 0 0 12984 0 0 0 1516 1633 t 5695 4097 12984 12984 0 0 0 0 3895 3278 // a 816 878 261 1523 1525 1523 37 1539 1545 1536 17 1531 1527 1524 565 769 c 357 125 635 13 8 9 27 9 9 8 28 11 20 10 156 222 g 180 136 26 10 26 21 21 13 8 19 16 16 8 12 105 130 t 214 428 645 21 8 14 1482 6 5 4 1506 9 12 21 741 446 // a 1080 1079 0 3966 0 0 0 0 0 759 1088 c 830 910 3966 0 0 0 0 3966 0 1011 842 g 779 741 0 0 0 0 0 0 0 1042 611 t 1277 1236 0 0 3966 3966 3966 0 3966 1154 1425 // ; Host name rsat ; Job started 2014-09-03.184101 ; Job done 2014-09-03.184101 ; Seconds 0.28 ; user 0.28 ; system 0.02 ; cuser 0 ; csystem 0