; convert-matrix -v 1 -i $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.txt ; Input files ; input /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.tf ; Input format transfac ; Output files ; output /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 1173 857 3161 3 5 52 3 4369 17 4506 4512 149 1831 1226 c 816 719 307 3 4 3 4509 16 4467 9 3 2623 988 1193 g 861 1532 915 4 3 4418 2 107 5 4 3 337 502 930 t 1671 1413 138 4511 4509 48 7 29 32 2 3 1412 1200 1172 // a 693 673 2588 0 0 0 0 0 2588 2586 1248 942 c 561 637 0 0 0 0 0 0 0 2 324 330 g 402 383 0 0 0 0 0 0 0 0 551 412 t 932 895 0 2588 2588 2588 2588 2588 0 0 465 904 // a 701 1073 23 1 2580 0 2542 0 2578 2579 307 920 c 409 457 6 0 0 2580 0 2580 0 1 755 634 g 616 697 30 0 0 0 38 0 2 0 388 415 t 854 353 2521 2579 0 0 0 0 0 0 1130 611 // a 596 606 1117 0 1138 1144 1145 1145 1145 0 621 489 c 148 179 6 1145 0 0 0 0 0 1145 225 198 g 165 156 9 0 7 0 0 0 0 0 78 212 t 236 204 13 0 0 1 0 0 0 0 221 246 // a 790 1154 0 0 0 0 5 0 2774 2774 284 977 c 474 551 0 1 0 2774 0 2774 0 0 848 665 g 595 751 0 0 2774 0 6 0 0 0 483 459 t 915 318 2774 2773 0 0 2763 0 0 0 1159 673 // ; Host name rsat ; Job started 2014-09-03.183659 ; Job done 2014-09-03.183659 ; Seconds 0.29 ; user 0.29 ; system 0.01 ; cuser 0 ; csystem 0