; convert-matrix -v 1 -i $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.txt ; Input files ; input /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.tf ; Input format transfac ; Output files ; output /home/rsat/rsat/public_html/tmp/wwwrun/2014/09/03/peak-motifs.2014-09-03.182940_2014-09-03.182940_LkVj4M/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 394 218 1344 6 10 132 6 1281 17 1366 1387 18 237 486 348 c 277 242 17 9 7 9 1392 26 1335 33 4 63 1048 300 369 g 313 341 33 4 46 166 3 48 5 1 6 13 43 155 231 t 419 602 9 1384 1340 1096 2 48 46 3 6 1309 75 462 455 // a 94 132 260 16 314 0 0 10 2 311 7 331 333 6 35 67 73 c 71 85 4 10 5 0 0 0 330 11 318 3 0 296 15 105 76 g 95 77 9 277 13 1 2 309 1 1 1 0 0 7 2 77 54 t 74 40 61 31 2 333 332 15 1 11 8 0 1 25 282 85 131 // a 162 113 401 15 413 0 0 7 36 40 396 423 432 2 126 150 c 77 108 4 27 6 0 0 0 303 14 17 10 0 15 102 90 g 98 128 9 350 11 0 1 422 24 365 2 0 1 7 112 76 t 96 84 19 41 3 433 432 4 70 14 18 0 0 409 93 117 // a 53 47 13 1 20 0 1 2 0 180 11 195 197 3 6 36 50 c 42 60 160 8 160 0 0 0 198 8 185 2 1 178 15 53 54 g 45 38 9 0 18 0 1 189 1 3 1 1 0 3 3 54 24 t 59 54 17 190 1 199 197 8 0 8 2 1 1 15 175 56 71 // a 73 84 193 16 219 0 0 4 0 221 11 226 224 2 20 52 44 c 48 64 6 163 4 0 0 0 227 3 213 1 0 205 12 64 62 g 45 44 16 18 0 0 3 206 0 1 1 0 1 4 0 58 48 t 62 36 13 31 5 228 225 18 1 3 3 1 3 17 196 54 74 // ; Host name rsat ; Job started 2014-09-03.185034 ; Job done 2014-09-03.185034 ; Seconds 0.29 ; user 0.29 ; system 0.01 ; cuser 0 ; csystem 0