RSA-tools - position-analysis result

Analysis: CEBPa_ChIP-seq_in_dog_liver_CRM_vs_Singleton ; 2nt 1str (06/09/2014 12:44)

Output file (tab): peak-motifs_ctrl_profiles-1str-ovlp_2nt_ci20.tab

Sequence ID Occ Overlaps Chi2 df Pval Eval Sig Rank

tg tg 312631 1136.9 37 0.0e+00 0 300.0 1

ca ca 311080 1107.6 37 0.0e+00 0 300.0 2

ta ta 269372 836.7 37 0.0e+00 0 300.0 3

tt tt 427158 831.9 37 0.0e+00 0 300.0 4

gc gc 176039 756.7 36 0.0e+00 0 300.0 5

aa aa 424815 729.6 37 0.0e+00 0 300.0 6

ac ac 218611 398.8 36 9.8e-63 1.6e-61 60.8 7

gt gt 219678 331.6 36 1.7e-49 2.6e-48 47.6 8

cg cg 42688 278.9 33 1.0e-40 1.6e-39 38.8 9

cc cc 198628 224.5 36 4.3e-29 6.9e-28 27.2 10

gg gg 197540 191.8 36 3.8e-23 6e-22 21.2 11

ag ag 285100 188.9 37 2.9e-22 4.6e-21 20.3 12

ct ct 286541 156.7 37 1.1e-16 1.8e-15 14.7 13

at at 321351 88.2 37 4.6e-06 7.3e-05 4.1 14

tc tc 245361 75.6 37 1.9e-04 0.003 2.5 15

ga ga 244698 67.8 37 1.5e-03 0.024 1.6 16

Sequence	ID	Occ	Chi2	df	Pval	Eval	Sig	Rank
tg	tg	312631	1136.9	37	0.0e+00	0	300.0	1
ca	ca	311080	1107.6	37	0.0e+00	0	300.0	2
ta	ta	269372	836.7	37	0.0e+00	0	300.0	3
tt	tt	427158	831.9	37	0.0e+00	0	300.0	4
gc	gc	176039	756.7	36	0.0e+00	0	300.0	5
aa	aa	424815	729.6	37	0.0e+00	0	300.0	6
ac	ac	218611	398.8	36	9.8e-63	1.6e-61	60.8	7
gt	gt	219678	331.6	36	1.7e-49	2.6e-48	47.6	8
cg	cg	42688	278.9	33	1.0e-40	1.6e-39	38.8	9
cc	cc	198628	224.5	36	4.3e-29	6.9e-28	27.2	10
gg	gg	197540	191.8	36	3.8e-23	6e-22	21.2	11
ag	ag	285100	188.9	37	2.9e-22	4.6e-21	20.3	12
ct	ct	286541	156.7	37	1.1e-16	1.8e-15	14.7	13
at	at	321351	88.2	37	4.6e-06	7.3e-05	4.1	14
tc	tc	245361	75.6	37	1.9e-04	0.003	2.5	15
ga	ga	244698	67.8	37	1.5e-03	0.024	1.6	16