/home/rsat/rsat/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o $RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab
 Program version       	1.118
 Input files
	file2 	$RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf
	file1 	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	alignments_1ton	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_alignments_1ton.tab
	match_table_txt	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.tab
	html_index   	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_index.html
	alignments_1ton_html	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates_alignments_1ton.html
	match_table_html	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates.html
	prefix       	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_vertebrates
 Matrices
	file1	15 matrices	$RSAT/public_html/tmp/wwwrun/2014/09/06/peak-motifs.2014-09-06.123915_2014-09-06.123915_sfIm4F/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	24	2	CrCCCTrsCCTGrCCyGGGkCACr
		file1	2	23	1	ATCCAAAGTCCAGAGCAGGGAAT
		file1	3	11	1513	mdGGGTCAGrr
		file1	4	24	1	GGCAGGGCAGCCGGGTCAGCCCTG
		file1	5	12	715	cmAAGGTCAGrr
		file1	6	24	2	TykGGCCAGyCCAAAGTCCArGAy
		file1	7	24	1	CACCTGCCCTTTGACCTGGCCACG
		file1	8	24	3	hdsGCmCmGGrCAkssyCAkGCCb
		file1	9	24	2	TmGGkCCAGkCCAAAGwCCAArwk
		file1	10	24	3	sdCCCAGCCAGrmCAkGGCwGGvk
		file1	11	21	18	ymAAGTCCAAAGTCCAGGGrw
		...	5 more matrices
	file2	263 matrices	$RSAT/public_html/data/motif_databases/JASPAR/jaspar_core_vertebrates_2013-11.tf
		file2		1		11		26		wwyTGyGGTww
		file2		2		9		185		GCCcbrrGs
		file2		3		6		20		CACGTG
		file2		4		6		24		yGCGTG
		file2		5		22		24		hwwrGmACryyvtGTwCchrms
		file2		6		11		40		CTAGGTGTGAA
		file2		7		20		12		drvkcasygrwGcRkrrCsr
		file2		8		14		13		TGAmCTTTGmmCyt
		file2		9		12		16		bbkGrTGACGym
		file2		10		12		39		rrrTGCAATmcc
		file2		11		8		10		TTTsGCGC
		...	253 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	logoDP       	Dot product between the logo matrices.
	8	NIcor        	Normalized Pearson correlation between the information content matrices. NIcor = Icor * Wr
	9	NSW          	Normalized Sandelin-Wasserman similarity. NSW = SW/w
	10	SSD          	sum of squared distance.
	11	NsEucl       	relative Euclidian similarity. NsEucl = (max(dEucl) - dEucl)/max(dEucl)
	12	w1           	Width of the first matrix
	13	w2           	Width of the second matrix
	14	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	15	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	16	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	17	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	18	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	19	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	20	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
	21	consensus1   	IUPAC consensus of matrix 1 (dots represent non-aligned columns)
	22	consensus2   	IUPAC consensus of matrix 2 (dots represent non-aligned columns)
	23	rcor         	Matching rank for cor
	24	rNcor        	Matching rank for Ncor
	25	rlogoDP      	Matching rank for logoDP
	26	rNIcor       	Matching rank for NIcor
	27	rNsEucl      	Matching rank for NsEucl
	28	rSSD         	Matching rank for SSD
	29	rNSW         	Matching rank for NSW
	30	rank_mean    	Mean of the matching ranks on all selected metrics
	31	match_rank   	Rank of the match (sorting by rank_mean)
id1 id2 name1 name2 cor Ncor logoDP NIcor NSW SSD NsEucl w1 w2 w W Wr wr1 wr2 strand offset consensus1 consensus2 rcor rNcor rlogoDP rNIcor rNsEucl rSSD rNSW rank_mean match_rank
oligos_6nt_test_vs_ctrl_m5 MA0141.2 oligos_6nt_test_vs_ctrl_m5 Esrrb 0.957 0.574 10.632 0.573 0.975 0.4527 0.94714 12 12 9 15 0.6000 0.7500 0.7500 D -3 cmAAGGTCA... ...yCAAGGTCA 1 9 5 5 1 1 1 3.2857 1
oligos_6nt_test_vs_ctrl_m5 MA0071.1 oligos_6nt_test_vs_ctrl_m5 RORA_1 0.913 0.632 10.808 0.628 0.951 0.8863 0.92604 12 10 9 13 0.6923 0.7500 0.9000 D -1 cmAAGGTCA... .wcwAGGTCA 3 5 4 4 5 3 3 3.8571 2
oligos_6nt_test_vs_ctrl_m5 MA0141.1 oligos_6nt_test_vs_ctrl_m5 Esrrb 0.956 0.574 10.474 0.573 0.975 0.4555 0.94698 12 12 9 15 0.6000 0.7500 0.7500 D -3 cmAAGGTCA... ...yCAAGGTCA 2 10 7 6 2 2 2 4.4286 3
oligos_6nt_test_vs_ctrl_m5 MA0592.1 oligos_6nt_test_vs_ctrl_m5 ESRRA 0.870 0.797 11.273 0.783 0.931 1.5109 0.92098 12 11 11 12 0.9167 0.9167 1.0000 D 0 cmAAGGTCAGr. yCAAGGTCAcm 6 1 2 1 9 10 6 5.0000 4
oligos_6nt_test_vs_ctrl_m5 MA0512.1 oligos_6nt_test_vs_ctrl_m5 Rxra 0.853 0.782 9.135 0.742 0.925 1.6602 0.91717 12 11 11 12 0.9167 0.9167 1.0000 D 0 cmAAGGTCAGr. CArAGKTCAgd 13 2 13 2 12 14 11 9.5714 5
oligos_8nt_test_vs_ctrl_m4 MA0114.2 oligos_8nt_test_vs_ctrl_m4 HNF4A 0.856 0.642 8.481 0.631 0.926 2.2244 0.92969 20 15 15 20 0.7500 0.7500 1.0000 D 4 ....CTGGACTTTGCCCTv. cTGrmCTTTGrmCyy 11 3 15 3 4 24 9 9.8571 6
oligos_8nt_test_vs_ctrl_m2 MA0512.1 oligos_8nt_test_vs_ctrl_m2 Rxra 0.905 0.433 10.330 0.424 0.939 1.3519 0.92526 23 11 11 23 0.4783 0.4783 1.0000 D 11 ...........CAAAGGkCAGv. CArAGKTCAgd 4 41 8 28 7 6 5 14.1429 7
oligos_8nt_test_vs_ctrl_m1 MA0484.1 oligos_8nt_test_vs_ctrl_m1 HNF4G 0.841 0.600 8.171 0.570 0.916 2.5131 0.92527 21 15 15 21 0.7143 0.7143 1.0000 D 1 .mAAGTCCAAAGTCCA..... arrGkyCAAAGkyCA 19 8 17 7 6 28 14 14.1429 8
oligos_6nt_test_vs_ctrl_m3 MA0258.1 oligos_6nt_test_vs_ctrl_m3 ESR2 0.848 0.518 6.561 0.507 0.930 1.5310 0.92046 11 18 11 18 0.6111 1.0000 0.6111 D 0 mdGGGTCAGrr cwrGGTCAsgk....... 15 20 26 12 10 12 7 14.5714 9
oligos_6nt_test_vs_ctrl_m5 MA0258.2 oligos_6nt_test_vs_ctrl_m5 ESR2 0.896 0.448 7.773 0.442 0.940 1.0748 0.91855 12 15 9 18 0.5000 0.7500 0.6000 D 3 ...AGGTCAGrr rGGTCAsms...... 5 38 18 23 11 4 4 14.7143 10
oligos_6nt_test_vs_ctrl_m5 MA0505.1 oligos_6nt_test_vs_ctrl_m5 Nr5a2 0.833 0.573 9.942 0.545 0.913 1.9094 0.91117 12 15 11 16 0.6875 0.9167 0.7333 D -4 cmAAGGTCAGr. ....TCAAGGyCAgs 22 11 11 9 23 18 18 16.0000 11
oligos_6nt_test_vs_ctrl_m5 MA0065.1 oligos_6nt_test_vs_ctrl_m5 PPARG::RXRA 0.831 0.498 11.103 0.484 0.915 2.0482 0.91567 12 20 12 20 0.6000 1.0000 0.6000 D -8 cmAAGGTCAGrr ........CAAAGGTCAymk 24 23 3 15 14 20 16 16.4286 12
oligos_6nt_test_vs_ctrl_m5 MA0258.1 oligos_6nt_test_vs_ctrl_m5 ESR2 0.849 0.491 6.707 0.476 0.919 1.7856 0.91410 12 18 11 19 0.5789 0.9167 0.6111 D 1 .mAAGGTCAGrr cwrGGTCAsgk....... 14 27 23 18 18 17 13 18.5714 13
oligos_6nt_test_vs_ctrl_m5 MA0160.1 oligos_6nt_test_vs_ctrl_m5 NR4A2 0.859 0.573 8.211 0.562 0.900 1.6058 0.88799 12 8 8 12 0.6667 0.6667 1.0000 D 2 ..AAGGTCAG.. aAGGTCAc 9 12 16 8 47 13 26 18.7143 14
oligos_6nt_test_vs_ctrl_m3 MA0071.1 oligos_6nt_test_vs_ctrl_m3 RORA_1 0.834 0.513 9.825 0.504 0.907 1.4860 0.89225 11 10 8 13 0.6154 0.7273 0.8000 D -2 mdGGGTCA... ..cwAGGTCA 21 21 12 13 43 8 20 19.7143 15
oligos_8nt_test_vs_ctrl_m2 MA0114.1 oligos_8nt_test_vs_ctrl_m2 HNF4A 0.862 0.487 6.666 0.497 0.904 2.4910 0.91415 23 13 13 23 0.5652 0.5652 1.0000 D 7 .......rGmCCAAAGGkCA... rGgbCAAAGkyCa 8 30 24 14 17 27 22 20.2857 16
oligos_8nt_test_vs_ctrl_m4 MA0484.1 oligos_8nt_test_vs_ctrl_m4 HNF4G 0.853 0.640 0.743 -0.132 0.930 2.1142 0.93146 20 15 15 20 0.7500 0.7500 1.0000 R 5 .....TGGACTTTGCCCTvb TGRMCTTTGRMCYYT 12 4 47 47 3 21 8 20.2857 17
oligos_8nt_test_vs_ctrl_m2 MA0484.1 oligos_8nt_test_vs_ctrl_m2 HNF4G 0.818 0.534 10.149 0.530 0.893 3.2119 0.91552 23 15 15 23 0.6522 0.6522 1.0000 D 5 .....ArrGmCCAAAGGkCA... arrGkyCAAAGkyCA 27 17 10 11 15 37 30 21.0000 18
oligos_8nt_test_vs_ctrl_m1 MA0114.2 oligos_8nt_test_vs_ctrl_m1 HNF4A 0.843 0.602 4.672 0.155 0.914 2.5799 0.92428 21 15 15 21 0.7143 0.7143 1.0000 R 2 ..AAGTCCAAAGTCCAG.... RRGKYCAAAGKYCAG 18 7 35 39 8 30 17 22.0000 19
oligos_6nt_test_vs_ctrl_m5 MA0065.2 oligos_6nt_test_vs_ctrl_m5 PPARG::RXRA 0.858 0.429 4.750 0.402 0.920 1.4319 0.90599 12 15 9 18 0.5000 0.7500 0.6000 D -6 cmAAGGTCA... ......cArAGGkcA 10 43 34 31 29 7 12 23.7143 20
oligos_8nt_test_vs_ctrl_m4 MA0114.1 oligos_8nt_test_vs_ctrl_m4 HNF4A 0.846 0.550 2.854 0.172 0.910 2.3525 0.91657 20 13 13 20 0.6500 0.6500 1.0000 R 5 .....TGGACTTTGCCCT.. TGRMCTTTGVCCY 16 15 44 36 13 25 19 24.0000 21
oligos_6nt_test_vs_ctrl_m3 MA0504.1 oligos_6nt_test_vs_ctrl_m3 NR2C2 0.775 0.568 6.381 0.530 0.899 2.2163 0.90430 11 15 11 15 0.7333 1.0000 0.7333 D 0 mdGGGTCAGrr mgrGGTCArAG.... 43 13 28 10 30 23 27 24.8571 22
oligos_6nt_test_vs_ctrl_m5 MA0017.1 oligos_6nt_test_vs_ctrl_m5 NR2F1 0.868 0.460 0.751 -0.135 0.926 1.3389 0.90909 12 14 9 17 0.5294 0.7500 0.6429 R -5 cmAAGGTCA... .....CAAAGKTCA 7 35 46 48 24 5 10 25.0000 23
oligos_6nt_test_vs_ctrl_m5 MA0504.1 oligos_6nt_test_vs_ctrl_m5 NR2C2 0.845 0.423 6.396 0.402 0.916 1.5170 0.90323 12 15 9 18 0.5000 0.7500 0.6000 D -6 cmAAGGTCA... ......CArAGGTCA 17 44 27 30 33 11 15 25.2857 24
oligos_7nt_test_vs_ctrl_m4 MA0114.1 oligos_7nt_test_vs_ctrl_m4 HNF4A 0.838 0.454 6.625 0.452 0.888 2.9089 0.90723 24 13 13 24 0.5417 0.5417 1.0000 D 7 .......AGkCCAAAGwCCA.... rGgbCAAAGkyCa 20 36 25 21 26 35 35 28.2857 25
oligos_7nt_test_vs_ctrl_m1 MA0114.2 oligos_7nt_test_vs_ctrl_m1 HNF4A 0.832 0.520 5.970 0.153 0.890 3.3003 0.91436 24 15 15 24 0.6250 0.6250 1.0000 R 6 ......CAGyCCAAAGTCCAr... RRGKYCAAAGKYCAG 23 18 31 40 16 38 33 28.4286 26
oligos_6nt_test_vs_ctrl_m5 MA0115.1 oligos_6nt_test_vs_ctrl_m5 NR1H2::RXRA 0.797 0.487 13.304 0.469 0.875 2.7537 0.89333 12 17 11 18 0.6111 0.9167 0.6471 D -6 cmAAGGTCAGr. ......CAAAGGTCAAc 35 29 1 20 42 33 40 28.5714 27
oligos_6nt_test_vs_ctrl_m3 MA0258.2 oligos_6nt_test_vs_ctrl_m3 ESR2 0.814 0.431 7.479 0.420 0.901 1.7834 0.89508 11 15 9 17 0.5294 0.8182 0.6000 D 2 ..GGGTCAGrr rGGTCAsms...... 30 42 19 29 41 16 24 28.7143 28
oligos_6nt_test_vs_ctrl_m5 MA0114.1 oligos_6nt_test_vs_ctrl_m5 HNF4A 0.818 0.460 3.992 0.424 0.901 1.7817 0.89513 12 13 9 16 0.5625 0.7500 0.6923 D -4 cmAAGGTCA... ....CAAAGkyCa 28 34 38 27 40 15 23 29.2857 29
oligos_8nt_test_vs_ctrl_m3 MA0484.1 oligos_8nt_test_vs_ctrl_m3 HNF4G 0.774 0.464 6.915 0.438 0.895 2.5211 0.90644 17 15 12 20 0.6000 0.7059 0.8000 D -3 ksCCAGAGTCCA..... ...GkyCAAAGkyCA 45 33 20 25 27 29 29 29.7143 30
oligos_8nt_test_vs_ctrl_m5 MA0594.1 oligos_8nt_test_vs_ctrl_m5 Hoxa9 0.826 0.413 6.314 0.388 0.906 1.5076 0.89147 13 11 8 16 0.5000 0.6154 0.7273 D -3 aaAAATCA..... ...ATmAATCA 25 46 29 33 45 9 21 29.7143 31
oligos_8nt_test_vs_ctrl_m3 MA0114.2 oligos_8nt_test_vs_ctrl_m3 HNF4A 0.784 0.537 3.897 0.157 0.900 2.5871 0.91251 17 15 13 19 0.6842 0.7647 0.8667 R -2 ksCCAGAGTCCAG.... ..GKYCAAAGKYCAG 39 16 39 38 21 31 25 29.8571 32
oligos_8nt_test_vs_ctrl_m1 MA0114.1 oligos_8nt_test_vs_ctrl_m1 HNF4A 0.799 0.495 5.209 0.470 0.886 2.9644 0.90635 21 13 13 21 0.6190 0.6190 1.0000 D 3 ...AGTCCAAAGTCCA..... rGgbCAAAGkyCa 33 25 33 19 28 36 37 30.1429 33
oligos_6nt_test_vs_ctrl_m3 MA0074.1 oligos_6nt_test_vs_ctrl_m3 RXRA::VDR 0.798 0.423 8.578 0.442 0.891 1.9539 0.89018 11 15 9 17 0.5294 0.8182 0.6000 D 2 ..GGGTCAGrr RGGTCAwcG...... 34 45 14 24 46 19 31 30.4286 34
oligos_8nt_test_vs_ctrl_m5 MA0047.1 oligos_8nt_test_vs_ctrl_m5 Foxa2 0.787 0.618 3.193 0.211 0.891 2.3988 0.90044 13 12 11 14 0.7857 0.8462 0.9167 R 2 ..AAATCAATAww RARYMAAYAWT. 38 6 43 34 36 26 32 30.7143 35
oligos_7nt_test_vs_ctrl_m4 MA0484.1 oligos_7nt_test_vs_ctrl_m4 HNF4G 0.776 0.485 10.252 0.478 0.862 4.1470 0.90400 24 15 15 24 0.6250 0.6250 1.0000 D 5 .....CCAGkCCAAAGwCCA.... arrGkyCAAAGkyCA 41 31 9 17 31 45 44 31.1429 36
oligos_8nt_test_vs_ctrl_m2 MA0017.1 oligos_8nt_test_vs_ctrl_m2 NR2F1 0.817 0.497 3.603 -0.066 0.896 2.9047 0.91392 23 14 14 23 0.6087 0.6087 1.0000 R 6 ......rrGmCCAAAGGkCA... ARGKKCAAAGKTCA 29 24 41 44 19 34 28 31.2857 37
oligos_8nt_test_vs_ctrl_m2 MA0114.2 oligos_8nt_test_vs_ctrl_m2 HNF4A 0.795 0.519 5.945 0.175 0.883 3.5138 0.91163 23 15 15 23 0.6522 0.6522 1.0000 R 6 ......rrGmCCAAAGGkCAG.. RRGKYCAAAGKYCAG 36 19 32 35 22 40 38 31.7143 38
oligos_7nt_test_vs_ctrl_m1 MA0484.1 oligos_7nt_test_vs_ctrl_m1 HNF4G 0.775 0.484 10.539 0.478 0.854 4.3879 0.90125 24 15 15 24 0.6250 0.6250 1.0000 D 5 .....CCAGyCCAAAGTCCA.... arrGkyCAAAGkyCA 42 32 6 16 35 47 46 32.0000 39
oligos_7nt_test_vs_ctrl_m4 MA0114.2 oligos_7nt_test_vs_ctrl_m4 HNF4A 0.800 0.500 6.018 0.161 0.874 3.7750 0.90841 24 15 15 24 0.6250 0.6250 1.0000 R 6 ......CAGkCCAAAGwCCAA... RRGKYCAAAGKYCAG 32 22 30 37 25 43 41 32.8571 40
oligos_6nt_test_vs_ctrl_m5 MA0112.2 oligos_6nt_test_vs_ctrl_m5 ESR1 0.751 0.451 4.613 0.445 0.889 2.6723 0.90367 12 20 12 20 0.6000 1.0000 0.6000 D -2 cmAAGGTCAGrr ..scmaGGtCAccc...... 47 37 36 22 32 32 34 34.2857 41
oligos_7nt_test_vs_ctrl_m1 MA0114.1 oligos_7nt_test_vs_ctrl_m1 HNF4A 0.801 0.434 6.718 0.434 0.863 3.5731 0.89718 24 13 13 24 0.5417 0.5417 1.0000 D 7 .......AGyCCAAAGTCCA.... rGgbCAAAGkyCa 31 40 22 26 39 42 43 34.7143 42
oligos_8nt_test_vs_ctrl_m4 MA0065.2 oligos_8nt_test_vs_ctrl_m4 PPARG::RXRA 0.751 0.563 0.673 -0.122 0.888 3.3682 0.91349 20 15 15 20 0.7500 0.7500 1.0000 R 5 .....TGGACTTTGCCCTvb TGMCCTYTGCCCYAS 48 14 48 46 20 39 36 35.8571 43
oligos_8nt_test_vs_ctrl_m5 MA0485.1 oligos_8nt_test_vs_ctrl_m5 Hoxc9 0.770 0.407 6.798 0.388 0.881 2.1422 0.88501 13 13 9 17 0.5294 0.6923 0.6923 D -4 aaAAATCAA.... ....ATAAATCwy 46 47 21 32 48 22 39 36.4286 44
oligos_7nt_test_vs_ctrl_m2 MA0114.1 oligos_7nt_test_vs_ctrl_m2 HNF4A 0.822 0.445 3.550 0.112 0.863 3.5656 0.89729 24 13 13 24 0.5417 0.5417 1.0000 R 4 ....TGCCCTTTGACCT....... TGRMCTTTGVCCY 26 39 42 41 38 41 42 38.4286 45
oligos_7nt_test_vs_ctrl_m2 MA0504.1 oligos_7nt_test_vs_ctrl_m2 NR2C2 0.787 0.492 3.742 0.013 0.855 4.3360 0.90184 24 15 15 24 0.6250 0.6250 1.0000 R 4 ....TGCCCTTTGACCTGG..... TGACCTYTGACCYCK 37 26 40 43 34 46 45 38.7143 46
oligos_7nt_test_vs_ctrl_m2 MA0065.2 oligos_7nt_test_vs_ctrl_m2 PPARG::RXRA 0.779 0.487 1.791 -0.076 0.844 4.6824 0.89799 24 15 15 24 0.6250 0.6250 1.0000 R 4 ....TGCCCTTTGACCTGG..... TGMCCTYTGCCCYAS 40 28 45 45 37 48 48 41.5714 47
oligos_6nt_test_vs_ctrl_m2 MA0114.2 oligos_6nt_test_vs_ctrl_m2 HNF4A 0.774 0.402 4.452 0.058 0.848 3.9457 0.89196 23 15 13 25 0.5200 0.5652 0.8667 R -2 ATCCAAAGTCCAG.......... ..GKYCAAAGKYCAG 44 48 37 42 44 44 47 43.7143 48 
 Host name	rsat
 Job started	2014-09-06.124934
 Job done	2014-09-06.125040
 Seconds	43.92
	user	43.92
	system	0.6
	cuser	21.03
;	csystem	0.82