; convert-matrix -v 1 -i $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.194903_2014-09-05.194903_oebJl9/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.194903_2014-09-05.194903_oebJl9/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.txt ; Input files ; input /vh/rsat/rsat/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.194903_2014-09-05.194903_oebJl9/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.tf ; Input format transfac ; Output files ; output /vh/rsat/rsat/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.194903_2014-09-05.194903_oebJl9/results/positions_6nt/peak-motifs_positions-2str-noov_6nt_ci50_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 8 0 12 0 0 12 12 12 0 4 c 1 0 0 0 12 0 0 0 3 0 g 3 4 0 0 0 0 0 0 7 3 t 0 8 0 12 0 0 0 0 2 5 // a 0 0 0 0 0 0 1 0 0 0 0 c 0 1 1 1 1 0 0 0 1 0 1 g 0 0 0 0 0 0 0 1 0 1 0 t 1 0 0 0 0 1 0 0 0 0 0 // ; Host name biow ; Job started 2014-09-05.194953 ; Job done 2014-09-05.194953 ; Seconds 0.25 ; user 0.25 ; system 0.02 ; cuser 0 ; csystem 0