/vh/rsat/rsat/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/data/motif_databases/footprintDB/footprintDB.motif.tf -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB.tab
 Program version       	1.118
 Input files
	file2 	$RSAT/public_html/data/motif_databases/footprintDB/footprintDB.motif.tf
	file1 	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	alignments_1ton	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB_alignments_1ton.tab
	match_table_txt	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB.tab
	html_index   	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB_index.html
	alignments_1ton_html	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB_alignments_1ton.html
	match_table_html	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB.html
	prefix       	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_vs_db/peak-motifs_motifs_vs_db_footprintDB
 Matrices
	file1	18 matrices	$RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	12	12	hkGAAGAGATcd
		file1	2	10	12	rkATCAAAsd
		file1	3	11	1	TCCCCTAGCGC
		file1	4	11	6	vsAGGGGCCgg
		file1	5	11	7	wwATATAAGkb
		file1	6	11	10	sgCTCAGGCgr
		file1	7	14	11	dymCCCyAGCCAyy
		file1	8	11	6	wkCACTCCAsg
		file1	9	13	39	wkCAGGCCGATvc
		file1	10	13	16	shTCGTTGGCTdv
		file1	11	12	34	dsTGGTAATTcw
		...	8 more matrices
	file2	4196 matrices	$RSAT/public_html/data/motif_databases/footprintDB/footprintDB.motif.tf
		file2		1		17		100		yyaymCATCAAwmwwmm
		file2		2		10		7		ACCGGAAGws
		file2		3		16		100		wwtksgTAATTACsdy
		file2		4		17		100		twrttaATTAwtaawwr
		file2		5		18		100		TCCGynnnnnnnnnCGGA
		file2		6		20		100		gwrastTTCCGGAAyrywrr
		file2		7		20		100		yrawygGyGCCGyrysackh
		file2		8		21		100		wmrmraAtmGAAGaaawawww
		file2		9		20		100		rkmkkakCACGTGmyyrvwy
		file2		10		6		1		CTATCA
		file2		11		18		66		hTTwCCwWAwwdGGhAat
		...	4186 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	logoDP       	Dot product between the logo matrices.
	8	NIcor        	Normalized Pearson correlation between the information content matrices. NIcor = Icor * Wr
	9	NSW          	Normalized Sandelin-Wasserman similarity. NSW = SW/w
	10	SSD          	sum of squared distance.
	11	NsEucl       	relative Euclidian similarity. NsEucl = (max(dEucl) - dEucl)/max(dEucl)
	12	w1           	Width of the first matrix
	13	w2           	Width of the second matrix
	14	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	15	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	16	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	17	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	18	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	19	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	20	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
	21	consensus1   	IUPAC consensus of matrix 1 (dots represent non-aligned columns)
	22	consensus2   	IUPAC consensus of matrix 2 (dots represent non-aligned columns)
	23	rcor         	Matching rank for cor
	24	rNcor        	Matching rank for Ncor
	25	rlogoDP      	Matching rank for logoDP
	26	rNIcor       	Matching rank for NIcor
	27	rNsEucl      	Matching rank for NsEucl
	28	rSSD         	Matching rank for SSD
	29	rNSW         	Matching rank for NSW
	30	rank_mean    	Mean of the matching ranks on all selected metrics
	31	match_rank   	Rank of the match (sorting by rank_mean)
id1 id2 name1 name2 cor Ncor logoDP NIcor NSW SSD NsEucl w1 w2 w W Wr wr1 wr2 strand offset consensus1 consensus2 rcor rNcor rlogoDP rNIcor rNsEucl rSSD rNSW rank_mean match_rank
positions_6nt_m1 6733_4euw_A_3D-footprint_20130124_ positions_6nt_m1 6733_4euw_A_3D-footprint_20130124_ 0.970 0.582 7.317 0.573 0.979 0.2535 0.94067 10 6 6 10 0.6000 0.6000 1.0000 D 3 ...TCAAAs. TcAAAg 8 37 49 23 7 8 8 20.0000 1
positions_6nt_m1 5900_Tcf7_DBD_HumanTF_1.0_ positions_6nt_m1 5900_Tcf7_DBD_HumanTF_1.0_ 0.885 0.737 10.861 0.744 0.934 1.3199 0.91876 10 12 10 12 0.8333 1.0000 0.8333 D -2 rkATCAAAsd ..ASATCAAAGg 63 5 4 2 35 141 76 46.5714 2
positions_7nt_m2 2613_MA0379.1_JASPAR_CORE_2009_ positions_7nt_m2 2613_MA0379.1_JASPAR_CORE_2009_ 0.999 0.454 9.094 0.454 0.999 0.0078 0.98751 11 5 5 11 0.4545 0.4545 1.0000 D 2 ..ATATA.... ATATA 1 209 12 103 1 1 1 46.8571 3
positions_8nt_m5 6044_1dux_F_3D-footprint_20130124_ positions_8nt_m5 6044_1dux_F_3D-footprint_20130124_ 0.932 0.544 3.997 0.523 0.972 0.3989 0.93620 12 7 7 12 0.5833 0.5833 1.0000 D 5 .....CCGGAtg cCGGAng 18 62 173 47 9 17 14 48.5714 4
positions_6nt_m1 1939_PB0082.1_JASPAR_CORE_2009_ positions_6nt_m1 1939_PB0082.1_JASPAR_CORE_2009_ 0.894 0.526 8.400 0.545 0.946 1.0744 0.92671 10 17 10 17 0.5882 1.0000 0.5882 D -3 rkATCAAAsd ...asATCAAAGg.... 53 82 26 32 16 88 44 48.7143 5
positions_7nt_m1 2615_MA0381.1_JASPAR_CORE_2009_ positions_7nt_m1 2615_MA0381.1_JASPAR_CORE_2009_ 0.926 0.505 6.941 0.508 0.959 0.4973 0.91689 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....GGCCgg GGCCrk 22 115 58 55 45 26 24 49.2857 6
positions_8nt_m5 5801_SPDEF_DBD_1_HumanTF_1.0_ positions_8nt_m5 5801_SPDEF_DBD_1_HumanTF_1.0_ 0.896 0.576 6.197 0.552 0.947 0.9566 0.92316 12 11 9 14 0.6429 0.7500 0.8182 D 3 ...ACCCGGAtg AmCCGGATg.. 46 43 84 28 27 76 42 49.4286 7
positions_7nt_m1 2588_MA0342.1_JASPAR_CORE_2009_ positions_7nt_m1 2588_MA0342.1_JASPAR_CORE_2009_ 0.994 0.452 8.688 0.451 0.995 0.0524 0.96761 11 5 5 11 0.4545 0.4545 1.0000 D 2 ..AGGGG.... AGGGG 2 216 18 107 2 2 2 49.8571 8
positions_8nt_m3 7458_HXD4_f1_HOCOMOCO_v9_ positions_8nt_m3 7458_HXD4_f1_HOCOMOCO_v9_ 0.931 0.543 3.927 0.539 0.968 0.4543 0.93192 12 7 7 12 0.5833 0.5833 1.0000 D 5 .....TAATTcw TAATTkw 19 63 179 39 12 22 15 49.8571 9
positions_6nt_m1 3755_UP00058_UniPROBE_20120919_ positions_6nt_m1 3755_UP00058_UniPROBE_20120919_ 0.893 0.525 8.396 0.544 0.946 1.0865 0.92629 10 17 10 17 0.5882 1.0000 0.5882 D -3 rkATCAAAsd ...wsATCAAAGg.... 55 85 27 33 19 91 47 51.0000 10
positions_7nt_m1 2604_MA0366.1_JASPAR_CORE_2009_ positions_7nt_m1 2604_MA0366.1_JASPAR_CORE_2009_ 0.990 0.450 8.421 0.446 0.992 0.0794 0.96015 11 5 5 11 0.4545 0.4545 1.0000 D 2 ..AGGGG.... AGGGG 4 221 24 114 4 4 4 53.5714 11
positions_6nt_m1 5494_LEF1_DBD_HumanTF_1.0_ positions_6nt_m1 5494_LEF1_DBD_HumanTF_1.0_ 0.885 0.590 11.169 0.590 0.933 1.3435 0.91804 10 15 10 15 0.6667 1.0000 0.6667 D -2 rkATCAAAsd ..AGATCAAAGg... 62 31 2 17 36 152 78 54.0000 12
positions_8nt_m5 5804_SPDEF_full_1_HumanTF_1.0_ positions_8nt_m5 5804_SPDEF_full_1_HumanTF_1.0_ 0.890 0.572 6.290 0.545 0.943 1.0305 0.92024 12 11 9 14 0.6429 0.7500 0.8182 D 3 ...ACCCGGAtg AmCCGGATg.. 58 46 80 31 32 81 54 54.5714 13
positions_6nt_m1 7669_TF7L2_f1_HOCOMOCO_v9_ positions_6nt_m1 7669_TF7L2_f1_HOCOMOCO_v9_ 0.868 0.789 7.297 0.802 0.934 1.3182 0.91882 10 11 10 11 0.9091 1.0000 0.9091 D 0 rkATCAAAsd aswTCAAAGg. 84 1 50 1 34 140 75 55.0000 14
positions_8nt_m5 2542_MA0280.1_JASPAR_CORE_2009_ positions_8nt_m5 2542_MA0280.1_JASPAR_CORE_2009_ 0.962 0.481 5.286 0.476 0.979 0.2526 0.94077 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....CCGGAt. CCGGar 12 156 120 80 6 7 6 55.2857 15
positions_6nt_m1 5863_TCF7L1_full_HumanTF_1.0_ positions_6nt_m1 5863_TCF7L1_full_HumanTF_1.0_ 0.876 0.730 10.106 0.717 0.930 1.3941 0.91651 10 12 10 12 0.8333 1.0000 0.8333 D -2 rkATCAAAsd ..AGATCAAAGG 75 6 8 3 48 171 83 56.2857 16
positions_7nt_m2 6272_1qn7_A_3D-footprint_20130124_ positions_7nt_m2 6272_1qn7_A_3D-footprint_20130124_ 0.947 0.689 5.800 0.285 0.966 0.5452 0.93474 11 8 8 11 0.7273 0.7273 1.0000 R 1 .wATATAAG.. TATATAAG 15 11 109 210 11 32 17 57.8571 17
positions_8nt_m3 6107_1hdd_C_3D-footprint_20130124_ positions_8nt_m3 6107_1hdd_C_3D-footprint_20130124_ 0.895 0.522 5.452 0.517 0.952 0.6666 0.91753 12 7 7 12 0.5833 0.5833 1.0000 D 4 ....GTAATTc. GTAAtna 48 92 115 51 40 42 31 59.8571 18
positions_6nt_m1 3751_UP00054_UniPROBE_20120919_ positions_6nt_m1 3751_UP00054_UniPROBE_20120919_ 0.883 0.520 7.753 0.540 0.941 1.1746 0.92336 10 17 10 17 0.5882 1.0000 0.5882 D -3 rkATCAAAsd ...asWTCAAAGg.... 65 93 39 37 25 109 61 61.2857 19
positions_6nt_m1 1940_PB0083.1_JASPAR_CORE_2009_ positions_6nt_m1 1940_PB0083.1_JASPAR_CORE_2009_ 0.883 0.520 7.643 0.540 0.941 1.1750 0.92335 10 17 10 17 0.5882 1.0000 0.5882 D -3 rkATCAAAsd ...asWTCAAAGg.... 66 94 45 36 26 110 62 62.7143 20
positions_8nt_m3 7341_DLX2_f1_HOCOMOCO_v9_ positions_8nt_m3 7341_DLX2_f1_HOCOMOCO_v9_ 0.903 0.527 4.447 0.540 0.948 0.7236 0.91407 12 7 7 12 0.5833 0.5833 1.0000 D 5 .....TAATTcw TAATTrt 38 79 154 38 53 49 40 64.4286 21
positions_7nt_m1 2587_MA0341.1_JASPAR_CORE_2009_ positions_7nt_m1 2587_MA0341.1_JASPAR_CORE_2009_ 0.965 0.439 8.133 0.432 0.974 0.2647 0.92724 11 5 5 11 0.4545 0.4545 1.0000 D 2 ..AGGGG.... rGGGG 10 248 32 126 14 11 11 64.5714 22
positions_7nt_m2 6327_1tgh_A_3D-footprint_20130124_ positions_7nt_m2 6327_1tgh_A_3D-footprint_20130124_ 0.890 0.519 8.646 0.505 0.936 0.8900 0.90470 11 8 7 12 0.5833 0.6364 0.8750 D -1 wwATATA.... .AtATATA 59 97 21 56 85 67 70 65.0000 23
positions_8nt_m5 5241_ELF1_full_HumanTF_1.0_ positions_8nt_m5 5241_ELF1_full_HumanTF_1.0_ 0.875 0.625 6.444 0.593 0.932 1.3557 0.91767 12 12 10 14 0.7143 0.8333 0.8333 D 2 ..AACCCGGAtg AACCCGGAAG.. 76 22 77 16 38 157 79 66.4286 24
positions_8nt_m3 1746_MA0187.1_JASPAR_CORE_2009_ positions_8nt_m3 1746_MA0187.1_JASPAR_CORE_2009_ 0.896 0.523 3.946 0.541 0.951 0.6796 0.91672 12 7 7 12 0.5833 0.5833 1.0000 D 5 .....TAATTcw TAATTry 44 90 177 35 46 43 35 67.1429 25
dyads_m3 1785_MA0227.1_JASPAR_CORE_2009_ dyads_m3 1785_MA0227.1_JASPAR_CORE_2009_ 0.902 0.492 7.693 0.494 0.942 0.7005 0.90136 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....TGACnk TGACAk 39 140 42 64 97 47 60 69.8571 26
positions_8nt_m3 7597_PRRX2_f1_HOCOMOCO_v9_ positions_8nt_m3 7597_PRRX2_f1_HOCOMOCO_v9_ 0.935 0.467 4.476 0.477 0.956 0.5260 0.91453 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....TAATTc. TAATTr 16 172 152 78 52 29 29 75.4286 27
positions_8nt_m5 5240_ELF1_DBD_HumanTF_1.0_ positions_8nt_m5 5240_ELF1_DBD_HumanTF_1.0_ 0.861 0.615 6.286 0.579 0.928 1.4413 0.91511 12 12 10 14 0.7143 0.8333 0.8333 D 2 ..AACCCGGAtg aACCCGGAAG.. 90 23 82 20 50 183 89 76.7143 28
positions_8nt_m5 2539_MA0275.1_JASPAR_CORE_2009_ positions_8nt_m5 2539_MA0275.1_JASPAR_CORE_2009_ 0.921 0.461 4.424 0.458 0.960 0.4845 0.91797 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....CCGGAt. CCGGAw 26 189 157 97 37 25 21 78.8571 29
positions_7nt_m5 2858_PF0171.1_JASPAR_CORE_2009_ positions_7nt_m5 2858_PF0171.1_JASPAR_CORE_2009_ 0.926 0.432 8.320 0.414 0.956 0.6120 0.92098 11 11 7 15 0.4667 0.6364 0.6364 D 4 ....CTCCAsg CTCCAsG.... 23 262 28 145 31 39 28 79.4286 30
positions_6nt_m1 2526_MA0151.1_JASPAR_CORE_2009_ positions_6nt_m1 2526_MA0151.1_JASPAR_CORE_2009_ 0.887 0.532 8.694 0.516 0.920 0.9602 0.88452 10 6 6 10 0.6000 0.6000 1.0000 D 2 ..ATCAAA.. ATyAAA 61 74 17 52 183 77 111 82.1429 31
positions_8nt_m5 5242_ELF3_DBD_HumanTF_1.0_ positions_8nt_m5 5242_ELF3_DBD_HumanTF_1.0_ 0.855 0.611 6.522 0.577 0.923 1.5308 0.91251 12 12 10 14 0.7143 0.8333 0.8333 D 2 ..AACCCGGAtg wACCCGGAAG.. 101 24 75 21 59 203 101 83.4286 32
positions_8nt_m3 7502_MSX2_f1_HOCOMOCO_v9_ positions_8nt_m3 7502_MSX2_f1_HOCOMOCO_v9_ 0.920 0.460 2.111 0.469 0.967 0.4020 0.92528 12 6 6 12 0.5000 0.5000 1.0000 D 6 ......AATTcw AATTkk 28 193 237 86 21 18 16 85.5714 33
dyads_m4 1921_PB0060.1_JASPAR_CORE_2009_ dyads_m4 1921_PB0060.1_JASPAR_CORE_2009_ 0.832 0.538 6.936 0.529 0.931 1.5076 0.92107 11 17 11 17 0.6471 1.0000 0.6471 D -2 ymTCCAGAccr ..watCCAGACrk.... 138 67 59 45 28 197 81 87.8571 34
dyads_m4 3697_UP00000_UniPROBE_20120919_ dyads_m4 3697_UP00000_UniPROBE_20120919_ 0.832 0.538 6.960 0.529 0.931 1.5090 0.92103 11 17 11 17 0.6471 1.0000 0.6471 D -2 ymTCCAGAccr ..wawCCAGACrk.... 139 68 57 44 29 199 82 88.2857 35
positions_8nt_m3 4964_en_DrosophilaTF_1.1_ positions_8nt_m3 4964_en_DrosophilaTF_1.1_ 0.921 0.460 4.019 0.464 0.951 0.5924 0.90929 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....TAATTc. TAATTa 27 191 171 93 71 35 36 89.1429 36
positions_6nt_m1 7627_SOX10_si_HOCOMOCO_v9_ positions_6nt_m1 7627_SOX10_si_HOCOMOCO_v9_ 0.863 0.518 5.805 0.510 0.929 0.8579 0.89085 10 6 6 10 0.6000 0.6000 1.0000 D 4 ....CAAAsd CAAwGr 88 98 108 53 139 63 87 90.8571 37
positions_8nt_m3 7537_NOBOX_si_HOCOMOCO_v9_ positions_8nt_m3 7537_NOBOX_si_HOCOMOCO_v9_ 0.883 0.476 4.193 0.502 0.943 0.8023 0.90952 12 8 7 13 0.5385 0.5833 0.8750 D 5 .....TAATTcw TAATTrs. 67 164 163 59 70 59 55 91.0000 38
dyads_m3 6403_2c9l_Z_3D-footprint_20130124_ dyads_m3 6403_2c9l_Z_3D-footprint_20130124_ 0.934 0.424 5.939 0.413 0.961 0.3867 0.91205 11 5 5 11 0.4545 0.4545 1.0000 D 5 .....TGACn. TgACt 17 282 102 147 60 15 19 91.7143 39
positions_7nt_m3 6491_2pe5_C_3D-footprint_20130124_ positions_7nt_m3 6491_2pe5_C_3D-footprint_20130124_ 0.951 0.432 4.678 0.421 0.964 0.3622 0.91489 11 5 5 11 0.4545 0.4545 1.0000 D 1 .gCTCA..... gcTCA 14 261 146 141 51 14 18 92.1429 40
dyads_m3 1810_MA0252.1_JASPAR_CORE_2009_ dyads_m3 1810_MA0252.1_JASPAR_CORE_2009_ 0.881 0.480 7.688 0.471 0.928 0.8611 0.89064 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....TGACnk TGACAs 70 157 43 84 140 64 88 92.2857 41
positions_8nt_m5 5244_ELF4_full_HumanTF_1.0_ positions_8nt_m5 5244_ELF4_full_HumanTF_1.0_ 0.846 0.604 6.024 0.563 0.920 1.5933 0.91074 12 12 10 14 0.7143 0.8333 0.8333 D 2 ..AACCCGGAtg aACCCGGAAG.. 111 26 93 24 65 222 109 92.8571 42
positions_7nt_m5 5958_1a0a_B_3D-footprint_20130124_ positions_7nt_m5 5958_1a0a_B_3D-footprint_20130124_ 0.924 0.420 5.834 0.422 0.961 0.3926 0.91139 11 5 5 11 0.4545 0.4545 1.0000 D 6 ......CCAsg CCAcg 24 291 106 138 62 16 20 93.8571 43
positions_8nt_m3 2510_MA0125.1_JASPAR_CORE_2009_ positions_8nt_m3 2510_MA0125.1_JASPAR_CORE_2009_ 0.877 0.472 3.962 0.501 0.942 0.8072 0.90924 12 8 7 13 0.5385 0.5833 0.8750 D 5 .....TAATTcw TAATTrs. 74 169 175 61 72 60 56 95.2857 44
positions_6nt_m1 1795_MA0237.1_JASPAR_CORE_2009_ positions_6nt_m1 1795_MA0237.1_JASPAR_CORE_2009_ 0.930 0.744 2.118 0.115 0.945 0.8722 0.91745 10 8 8 10 0.8000 0.8000 1.0000 R 1 .kATCAAAs. KWTCAAAR 21 4 235 256 42 65 48 95.8571 45
positions_8nt_m5 7494_MECP2_f1_HOCOMOCO_v9_ positions_8nt_m5 7494_MECP2_f1_HOCOMOCO_v9_ 0.897 0.449 5.318 0.456 0.943 0.6836 0.90256 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....CCGGAt. CCGGrr 41 226 119 101 90 44 53 96.2857 46
dyads_m3 6291_1r0n_A_3D-footprint_20130124_ dyads_m3 6291_1r0n_A_3D-footprint_20130124_ 0.930 0.423 5.339 0.414 0.959 0.4062 0.90986 11 5 5 11 0.4545 0.4545 1.0000 D 5 .....TGACn. TGaCc 20 284 118 146 68 19 22 96.7143 47
positions_8nt_m3 6108_1hdd_CD_3D-footprint_20130124_ positions_8nt_m3 6108_1hdd_CD_3D-footprint_20130124_ 0.882 0.441 5.752 0.441 0.947 0.8407 0.91896 12 12 8 16 0.5000 0.6667 0.6667 D 4 ....GTAATTcw GTAATnan.... 69 243 110 120 33 61 41 96.7143 48
positions_8nt_m5 5243_ELF3_full_HumanTF_1.0_ positions_8nt_m5 5243_ELF3_full_HumanTF_1.0_ 0.849 0.566 6.362 0.530 0.920 1.5986 0.91060 12 13 10 15 0.6667 0.8333 0.7692 D 2 ..AACCCGGAtg wACCCGGAAG... 108 51 79 41 66 224 110 97.0000 49
dyads_m3 7677_TGIF1_si_HOCOMOCO_v9_ dyads_m3 7677_TGIF1_si_HOCOMOCO_v9_ 0.874 0.477 7.265 0.464 0.926 0.8888 0.88890 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....TGACnk TGACAg 81 163 51 92 153 66 94 100.0000 50
positions_8nt_m1 5095_SigD_2_DBTBS_1.0_ positions_8nt_m1 5095_SigD_2_DBTBS_1.0_ 0.860 0.529 6.075 0.528 0.915 1.3588 0.89697 13 8 8 13 0.6154 0.6154 1.0000 D 5 .....GCCGATvc GCCGATAT 95 76 92 46 111 162 121 100.4286 51
positions_8nt_m3 4947_ap_DrosophilaTF_1.1_ positions_8nt_m3 4947_ap_DrosophilaTF_1.1_ 0.895 0.447 4.181 0.437 0.950 0.5986 0.90882 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....TAATTc. TAATnn 50 227 164 123 73 36 37 101.4286 52
positions_6nt_m1 1804_MA0246.1_JASPAR_CORE_2009_ positions_6nt_m1 1804_MA0246.1_JASPAR_CORE_2009_ 0.910 0.546 3.914 0.146 0.942 0.6943 0.90180 10 6 6 10 0.6000 0.6000 1.0000 R 0 rkATCA.... GTATCA 32 59 180 243 96 45 59 102.0000 53
positions_8nt_m5 5239_EHF_full_HumanTF_1.0_ positions_8nt_m5 5239_EHF_full_HumanTF_1.0_ 0.832 0.594 5.347 0.553 0.920 1.6077 0.91034 12 12 10 14 0.7143 0.8333 0.8333 D 2 ..AACCCGGAtg wACCCGGAAG.. 137 29 117 27 67 229 113 102.7143 54
positions_6nt_m1 1758_MA0199.1_JASPAR_CORE_2009_ positions_6nt_m1 1758_MA0199.1_JASPAR_CORE_2009_ 0.960 0.480 2.009 0.036 0.973 0.2689 0.92667 10 5 5 10 0.5000 0.5000 1.0000 R 1 .kATCA.... TATCA 13 159 242 274 17 13 13 104.4286 55
positions_6nt_m1 3780_UP00083_UniPROBE_20120919_ positions_6nt_m1 3780_UP00083_UniPROBE_20120919_ 0.896 0.527 3.381 0.051 0.946 1.0779 0.92659 10 17 10 17 0.5882 1.0000 0.5882 R -3 rkATCAAAsd ...ASATCAAAGG.... 47 78 196 266 18 89 45 105.5714 56
dyads_m3 6477_2nny_A_3D-footprint_20130124_ dyads_m3 6477_2nny_A_3D-footprint_20130124_ 0.867 0.473 4.762 0.450 0.935 0.7760 0.89619 11 6 6 11 0.5455 0.5455 1.0000 D 0 bwtCCT..... cTTCCT 85 167 141 108 115 57 73 106.5714 57
dyads_m3 2703_PF0016.1_JASPAR_CORE_2009_ dyads_m3 2703_PF0016.1_JASPAR_CORE_2009_ 0.861 0.502 7.816 0.483 0.911 1.2472 0.88719 11 8 7 12 0.5833 0.6364 0.8750 D -1 bwtCCTG.... .yTTCCTG 92 122 38 74 164 123 134 106.7143 58
positions_6nt_m1 2684_PB0084.1_JASPAR_CORE_2009_ positions_6nt_m1 2684_PB0084.1_JASPAR_CORE_2009_ 0.895 0.526 3.370 0.051 0.945 1.0921 0.92610 10 17 10 17 0.5882 1.0000 0.5882 R -3 rkATCAAAsd ...ASATCAAAGG.... 51 80 199 265 20 93 49 108.1429 59
positions_8nt_m4 2529_MA0163.1_JASPAR_CORE_2009_ positions_8nt_m4 2529_MA0163.1_JASPAR_CORE_2009_ 0.884 0.419 4.896 0.422 0.949 0.9104 0.92503 14 14 9 19 0.4737 0.6429 0.6429 D -5 sgAAGGGGG..... .....CcwmGGGGG 64 297 133 139 22 72 38 109.2857 60
dyads_m3 7306_ATF3_f1_HOCOMOCO_v9_ dyads_m3 7306_ATF3_f1_HOCOMOCO_v9_ 0.895 0.413 5.654 0.423 0.949 0.6119 0.90781 11 8 6 13 0.4615 0.5455 0.7500 D 5 .....TGACnk TGAyky.. 49 317 112 137 75 38 39 109.5714 61
positions_6nt_m1 2760_PF0073.1_JASPAR_CORE_2009_ positions_6nt_m1 2760_PF0073.1_JASPAR_CORE_2009_ 0.971 0.583 0.000 -0.189 0.978 0.2639 0.93946 10 6 6 10 0.6000 0.6000 1.0000 R 3 ...TCAAAs. TCAAAG 7 34 351 352 8 10 9 110.1429 62
positions_6nt_m1 7260_RVE1_2_ArabidopsisPBM_20140210_ positions_6nt_m1 7260_RVE1_2_ArabidopsisPBM_20140210_ 0.861 0.574 4.351 0.556 0.909 1.4483 0.89363 10 10 8 12 0.6667 0.8000 0.8000 D -2 rkATCAAA.. ..atATCwaw 93 45 159 26 129 184 138 110.5714 63
positions_7nt_m1 2602_MA0364.1_JASPAR_CORE_2009_ positions_7nt_m1 2602_MA0364.1_JASPAR_CORE_2009_ 0.909 0.578 1.969 0.011 0.945 0.7670 0.91153 11 7 7 11 0.6364 0.6364 1.0000 R 0 vsAGGGG.... TCAGGGG 33 42 249 285 61 55 50 110.7143 64
positions_7nt_m2 2427_MA0033.1_JASPAR_CORE_2009_ positions_7nt_m2 2427_MA0033.1_JASPAR_CORE_2009_ 0.854 0.498 4.621 0.481 0.922 1.0897 0.89455 11 8 7 12 0.5833 0.6364 0.8750 D -1 wwATATA.... .wdayATA 102 129 148 75 124 92 106 110.8571 65
positions_8nt_m2 7524_NFIA+NFIB+NFIC+NFIX_si_HOCOMOCO_v9_ positions_8nt_m2 7524_NFIA+NFIB+NFIC+NFIX_si_HOCOMOCO_v9_ 0.908 0.419 3.530 0.410 0.955 0.5370 0.91364 13 6 6 13 0.4615 0.4615 1.0000 D 5 .....TTGGCT.. TTGGCw 34 296 189 149 54 30 30 111.7143 66
oligos_6nt_mkv3 2470_MA0080.1_JASPAR_CORE_2009_ oligos_6nt_mkv3 2470_MA0080.1_JASPAR_CORE_2009_ 0.878 0.439 5.219 0.428 0.941 0.7117 0.90058 12 6 6 12 0.5000 0.5000 1.0000 D 0 hkGAAG...... sGGAAs 72 245 122 134 100 48 63 112.0000 67
dyads_m4 2481_MA0092.1_JASPAR_CORE_2009_ dyads_m4 2481_MA0092.1_JASPAR_CORE_2009_ 0.846 0.769 3.725 0.338 0.932 1.3589 0.91757 11 10 10 11 0.9091 0.9091 1.0000 R 0 ymTCCAGAcc. AWKCCAGAYS 110 2 184 207 39 163 80 112.1429 68
positions_6nt_m1 3764_UP00067_UniPROBE_20120919_ positions_6nt_m1 3764_UP00067_UniPROBE_20120919_ 0.891 0.524 3.477 0.048 0.942 1.1540 0.92404 10 17 10 17 0.5882 1.0000 0.5882 R -3 rkATCAAAsd ...ASATCAAAGG.... 56 86 195 268 23 102 57 112.4286 69
positions_6nt_m1 1904_PB0040.1_JASPAR_CORE_2009_ positions_6nt_m1 1904_PB0040.1_JASPAR_CORE_2009_ 0.891 0.524 3.492 0.046 0.942 1.1570 0.92394 10 17 10 17 0.5882 1.0000 0.5882 R -3 rkATCAAAsd ...ASATCAAAGG.... 57 87 193 269 24 104 58 113.1429 70
positions_8nt_m5 7366_ERG_f1_HOCOMOCO_v9_ positions_8nt_m5 7366_ERG_f1_HOCOMOCO_v9_ 0.896 0.418 4.791 0.417 0.945 0.7743 0.91111 12 10 7 15 0.4667 0.5833 0.7000 D 5 .....CCGGAtg CCGGAAr... 45 299 139 143 63 56 51 113.7143 71
positions_6nt_m1 7482_LEF1_f1_HOCOMOCO_v9_ positions_6nt_m1 7482_LEF1_f1_HOCOMOCO_v9_ 0.917 0.550 2.545 0.030 0.939 0.7262 0.89957 10 6 6 10 0.6000 0.6000 1.0000 R 2 ..ATCAAA.. WWCAAA 31 58 222 276 104 50 64 115.0000 72
dyads_m3 5025_HVH21_Athamap_20091028_ dyads_m3 5025_HVH21_Athamap_20091028_ 0.787 0.606 6.270 0.609 0.912 1.7567 0.90628 11 12 10 13 0.7692 0.9091 0.8333 D 1 .wtCCTGACnk bmysTGACrg.. 219 25 83 9 79 268 129 116.0000 73
dyads_m3 1766_MA0207.1_JASPAR_CORE_2009_ dyads_m3 1766_MA0207.1_JASPAR_CORE_2009_ 0.862 0.470 7.371 0.456 0.915 1.0211 0.88091 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....TGACnk TGACAG 89 170 47 102 207 80 123 116.8571 74
positions_6nt_m1 2455_MA0064.1_JASPAR_CORE_2009_ positions_6nt_m1 2455_MA0064.1_JASPAR_CORE_2009_ 0.883 0.441 6.129 0.457 0.930 0.6997 0.88171 10 5 5 10 0.5000 0.5000 1.0000 D 5 .....AAAsd AAAGy 68 241 89 99 201 46 84 118.2857 75
positions_8nt_m3 1790_MA0232.1_JASPAR_CORE_2009_ positions_8nt_m3 1790_MA0232.1_JASPAR_CORE_2009_ 0.875 0.437 4.038 0.445 0.938 0.7411 0.89854 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....TAATTc. TAATkR 77 251 169 117 106 51 67 119.7143 76
positions_6nt_m1 2415_MA0021.1_JASPAR_CORE_2009_ positions_6nt_m1 2415_MA0021.1_JASPAR_CORE_2009_ 0.897 0.408 6.134 0.421 0.939 0.6145 0.88914 10 6 5 11 0.4545 0.5000 0.8333 D 5 .....AAAsd AAAGy. 42 328 87 140 150 40 66 121.8571 77
positions_8nt_m5 7360_ELK1_f1_HOCOMOCO_v9_ positions_8nt_m5 7360_ELK1_f1_HOCOMOCO_v9_ 0.850 0.458 3.086 0.437 0.936 0.9024 0.90404 12 8 7 13 0.5385 0.5833 0.8750 D 5 .....CCGGAtg CCGGAAr. 105 198 203 124 86 68 72 122.2857 78
positions_6nt_m1 6289_1qrv_A_3D-footprint_20130124_ positions_6nt_m1 6289_1qrv_A_3D-footprint_20130124_ 0.897 0.408 5.451 0.403 0.943 0.5688 0.89334 10 6 5 11 0.4545 0.5000 0.8333 D -1 rkATC..... .nTATC 43 330 116 155 130 33 52 122.7143 79
positions_8nt_m3 6515_2vy1_A_3D-footprint_20130124_ positions_8nt_m3 6515_2vy1_A_3D-footprint_20130124_ 0.788 0.591 6.021 0.583 0.906 1.6951 0.89771 12 9 9 12 0.7500 0.7500 1.0000 D 2 ..TGGTAATTc. TGGTnnnTA 217 30 94 19 109 247 154 124.2857 80
dyads_m3 6562_3dzu_A_3D-footprint_20130124_ dyads_m3 6562_3dzu_A_3D-footprint_20130124_ 0.906 0.412 4.328 0.399 0.946 0.5404 0.89604 11 5 5 11 0.4545 0.4545 1.0000 D 5 .....TGACn. TGACC 37 320 160 160 116 31 46 124.2857 81
positions_8nt_m3 1767_MA0208.1_JASPAR_CORE_2009_ positions_8nt_m3 1767_MA0208.1_JASPAR_CORE_2009_ 0.865 0.504 4.902 0.504 0.905 1.3321 0.88341 12 7 7 12 0.5833 0.5833 1.0000 D 5 .....TAATTcw TAATTAA 87 119 132 57 191 145 160 127.2857 82
positions_6nt_m1 7663_TCF7_f1_HOCOMOCO_v9_ positions_6nt_m1 7663_TCF7_f1_HOCOMOCO_v9_ 0.802 0.601 6.511 0.603 0.899 1.8177 0.89407 10 11 9 12 0.7500 0.9000 0.8182 D 1 .kATCAAAsd swwCAAAGs.. 187 27 76 14 126 275 194 128.4286 83
positions_8nt_m3 2465_MA0075.1_JASPAR_CORE_2009_ positions_8nt_m3 2465_MA0075.1_JASPAR_CORE_2009_ 0.983 0.410 1.577 0.069 0.979 0.2107 0.93509 12 5 5 12 0.4167 0.4167 1.0000 R 5 .....TAATT.. TAATT 6 323 286 264 10 6 7 128.8571 84
positions_8nt_m1 2429_MA0035.1_JASPAR_CORE_2009_ positions_8nt_m1 2429_MA0035.1_JASPAR_CORE_2009_ 0.872 0.402 3.480 0.405 0.952 0.5716 0.91090 13 6 6 13 0.4615 0.4615 1.0000 D 7 .......CGATvc sGATgs 82 346 194 152 64 34 32 129.1429 85
positions_6nt_m1 2445_MA0053.1_JASPAR_CORE_2009_ positions_6nt_m1 2445_MA0053.1_JASPAR_CORE_2009_ 0.875 0.437 6.131 0.453 0.925 0.7511 0.87743 10 5 5 10 0.5000 0.5000 1.0000 D 5 .....AAAsd AAAGc 80 254 88 104 232 54 97 129.8571 86
positions_6nt_m2 2588_MA0342.1_JASPAR_CORE_2009_ positions_6nt_m2 2588_MA0342.1_JASPAR_CORE_2009_ 0.994 0.452 0.018 -0.150 0.995 0.0524 0.96761 11 5 5 11 0.4545 0.4545 1.0000 R 1 .CCCCT..... CCCCT 2 216 350 340 2 2 2 130.5714 87
dyads_m3 5102_SigH_1_DBTBS_1.0_ dyads_m3 5102_SigH_1_DBTBS_1.0_ 0.907 0.453 0.959 0.037 0.958 0.5005 0.91662 11 7 6 12 0.5000 0.5455 0.8571 R -1 bwtCCT..... .WHTCCT 36 212 295 273 47 27 25 130.7143 88
positions_6nt_m2 2604_MA0366.1_JASPAR_CORE_2009_ positions_6nt_m2 2604_MA0366.1_JASPAR_CORE_2009_ 0.990 0.450 0.000 -0.143 0.992 0.0794 0.96015 11 5 5 11 0.4545 0.4545 1.0000 R 1 .CCCCT..... CCCCT 4 221 351 335 4 4 4 131.8571 89
positions_8nt_m3 5210_DLX5_FL_HumanTF_1.0_ positions_8nt_m3 5210_DLX5_FL_HumanTF_1.0_ 0.808 0.539 1.911 0.403 0.928 1.1540 0.90505 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw DTAATTRB 171 66 262 154 82 101 90 132.2857 90
positions_8nt_m3 5218_Dlx1_DBD_HumanTF_1.0_ positions_8nt_m3 5218_Dlx1_DBD_HumanTF_1.0_ 0.813 0.542 2.111 0.383 0.927 1.1607 0.90477 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw KTAATTRS 161 64 236 182 84 107 92 132.2857 91
dyads_m3 6695_3ri4_A_3D-footprint_20130124_ dyads_m3 6695_3ri4_A_3D-footprint_20130124_ 0.923 0.503 0.136 -0.154 0.958 0.5069 0.91609 11 6 6 11 0.5455 0.5455 1.0000 R 0 bwtCCT..... CATCCT 25 121 335 343 49 28 26 132.4286 92
positions_7nt_m3 7566_PAX5_si_HOCOMOCO_v9_ positions_7nt_m3 7566_PAX5_si_HOCOMOCO_v9_ 0.843 0.537 6.019 0.430 0.903 1.3554 0.88240 11 7 7 11 0.6364 0.6364 1.0000 R 1 .gCTCAGG... CCTCAGC 114 71 95 128 197 155 171 133.0000 93
dyads_m3 328_RAV1_2__Athamap_20091028_ dyads_m3 328_RAV1_2__Athamap_20091028_ 0.757 0.694 6.923 0.676 0.907 2.0393 0.90820 11 12 11 12 0.9167 1.0000 0.9167 D -1 bwtCCTGACnk .tCaCCTGrssy 330 10 60 5 74 309 146 133.4286 94
positions_7nt_m2 6725_4aik_A_3D-footprint_20130124_ positions_7nt_m2 6725_4aik_A_3D-footprint_20130124_ 0.829 0.528 6.685 0.509 0.898 1.4234 0.87948 11 7 7 11 0.6364 0.6364 1.0000 D 1 .wATATAA... CATAnAA 144 77 70 54 217 179 199 134.2857 95
positions_8nt_m4 2448_MA0057.1_JASPAR_CORE_2009_ positions_8nt_m4 2448_MA0057.1_JASPAR_CORE_2009_ 0.783 0.559 4.017 0.548 0.915 1.7012 0.90777 14 10 10 14 0.7143 0.7143 1.0000 D 1 .gAAGGGGGrG... bkAKGGGkrr 237 55 172 29 76 251 122 134.5714 96
positions_8nt_m5 1889_PB0024.1_JASPAR_CORE_2009_ positions_8nt_m5 1889_PB0024.1_JASPAR_CORE_2009_ 0.763 0.572 6.615 0.607 0.910 2.1710 0.91318 12 16 12 16 0.7500 1.0000 0.7500 D -1 dtAACCCGGAtg .mvwACCCGCATv... 299 47 73 10 56 321 137 134.7143 97
positions_6nt_m2 2623_MA0396.1_JASPAR_CORE_2009_ positions_6nt_m2 2623_MA0396.1_JASPAR_CORE_2009_ 0.837 0.558 10.099 0.542 0.888 1.7968 0.88152 11 9 8 12 0.6667 0.7273 0.8889 D 3 ...CCTAGCGC rcTAGCGc. 125 56 9 34 202 273 249 135.4286 98
positions_8nt_m3 5211_DLX6_DBD_HumanTF_1.0_ positions_8nt_m3 5211_DLX6_DBD_HumanTF_1.0_ 0.810 0.540 2.245 0.380 0.925 1.1999 0.90318 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw KTAATTRS 166 65 230 187 89 116 96 135.5714 99
positions_8nt_m5 3767_UP00070_UniPROBE_20120919_ positions_8nt_m5 3767_UP00070_UniPROBE_20120919_ 0.762 0.572 6.606 0.606 0.909 2.1762 0.91307 12 16 12 16 0.7500 1.0000 0.7500 D -1 dtAACCCGGAtg .mvwACCCGCATv... 302 48 74 12 57 323 139 136.4286 100
oligos_6nt_mkv3 5987_1awc_A_3D-footprint_20130124_ oligos_6nt_mkv3 5987_1awc_A_3D-footprint_20130124_ 0.857 0.428 6.011 0.401 0.924 0.9099 0.88758 12 6 6 12 0.5000 0.5000 1.0000 D 0 hkGAAG...... cGGAAg 98 271 96 157 163 71 100 136.5714 101
positions_8nt_m3 5209_DLX4_DBD_HumanTF_1.0_ positions_8nt_m3 5209_DLX4_DBD_HumanTF_1.0_ 0.806 0.537 1.982 0.383 0.926 1.1790 0.90403 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw KTAATTRS 173 70 245 181 87 112 93 137.2857 102
dyads_m3 6038_1dh3_AC_3D-footprint_20130124_ dyads_m3 6038_1dh3_AC_3D-footprint_20130124_ 0.870 0.401 6.725 0.387 0.929 0.8494 0.89139 11 8 6 13 0.4615 0.5455 0.7500 D 5 .....TGACnk TGACGn.. 83 349 69 178 137 62 85 137.5714 103
dyads_m4 7423_HAND1_si_HOCOMOCO_v9_ dyads_m4 7423_HAND1_si_HOCOMOCO_v9_ 0.860 0.717 0.284 -0.134 0.938 1.2487 0.92098 11 11 10 12 0.8333 0.9091 0.9091 R -1 ymTCCAGAcc. .AWKCCAGAYV 94 7 321 327 30 124 68 138.7143 104
positions_6nt_m1 6344_1vtn_C_3D-footprint_20130124_ positions_6nt_m1 6344_1vtn_C_3D-footprint_20130124_ 0.836 0.488 5.176 0.475 0.905 1.3329 0.88338 10 9 7 12 0.5833 0.7000 0.7778 D -2 rkATCAA... ..AnnTCAa 127 145 125 81 192 146 161 139.5714 105
positions_6nt_m2 2587_MA0341.1_JASPAR_CORE_2009_ positions_6nt_m2 2587_MA0341.1_JASPAR_CORE_2009_ 0.965 0.439 0.052 -0.152 0.974 0.2647 0.92724 11 5 5 11 0.4545 0.4545 1.0000 R 1 .CCCCT..... CCCCY 10 248 347 342 14 11 11 140.4286 106
dyads_m3 5520_MEIS1_DBD_HumanTF_1.0_ dyads_m3 5520_MEIS1_DBD_HumanTF_1.0_ 0.805 0.512 5.969 0.493 0.903 1.3627 0.88208 11 7 7 11 0.6364 0.6364 1.0000 D 4 ....CTGACnk wTGACAg 177 106 97 66 199 164 175 140.5714 107
positions_8nt_m3 5208_DLX3_DBD_HumanTF_1.0_ positions_8nt_m3 5208_DLX3_DBD_HumanTF_1.0_ 0.805 0.537 1.780 0.378 0.928 1.1564 0.90495 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw KTAATTRS 176 72 274 191 83 103 91 141.4286 108
positions_8nt_m5 3735_UP00038_UniPROBE_20120919_ positions_8nt_m5 3735_UP00038_UniPROBE_20120919_ 0.776 0.582 4.519 0.466 0.918 1.9601 0.91750 12 16 12 16 0.7500 1.0000 0.7500 R -1 dtAACCCGGAtg .ARDATCCGGATG... 257 36 150 90 41 299 117 141.4286 109
positions_7nt_m3 5875_TFAP2B_DBD_2_HumanTF_1.0_ positions_7nt_m3 5875_TFAP2B_DBD_2_HumanTF_1.0_ 0.785 0.654 7.834 0.607 0.888 2.2404 0.89416 11 11 10 12 0.8333 0.9091 0.9091 D -1 sgCTCAGGCg. .GCCysAGGCd 229 14 37 11 125 330 248 142.0000 110
positions_6nt_m2 3076_HipB_RegulonDB_7.5_ positions_6nt_m2 3076_HipB_RegulonDB_7.5_ 0.850 0.492 11.098 0.472 0.892 2.3750 0.90093 11 19 11 19 0.5789 1.0000 0.5789 D -2 TCCCCTAGCGC ..TCCbbKWdhGM...... 107 141 3 83 98 337 226 142.1429 111
positions_7nt_m3 6022_1cjg_A_3D-footprint_20130124_ positions_7nt_m3 6022_1cjg_A_3D-footprint_20130124_ 0.900 0.409 3.648 0.375 0.939 0.6115 0.88941 11 5 5 11 0.4545 0.4545 1.0000 D 1 .gCTCA..... GCTcA 40 326 186 193 149 37 65 142.2857 112
positions_7nt_m3 5902_Tcfap2a_DBD_2_HumanTF_1.0_ positions_7nt_m3 5902_Tcfap2a_DBD_2_HumanTF_1.0_ 0.785 0.654 7.151 0.606 0.890 2.2086 0.89492 11 11 10 12 0.8333 0.9091 0.9091 D -1 sgCTCAGGCg. .GCCysAGGCd 230 15 53 13 120 326 241 142.5714 113
positions_8nt_m5 1935_PB0077.1_JASPAR_CORE_2009_ positions_8nt_m5 1935_PB0077.1_JASPAR_CORE_2009_ 0.775 0.582 4.519 0.465 0.918 1.9669 0.91736 12 16 12 16 0.7500 1.0000 0.7500 R -1 dtAACCCGGAtg .ARWATCCGGATG... 258 39 151 91 43 300 118 142.8571 114
positions_8nt_m5 7355_EHF_si_HOCOMOCO_v9_ positions_8nt_m5 7355_EHF_si_HOCOMOCO_v9_ 0.786 0.561 4.957 0.519 0.904 1.9118 0.90223 12 12 10 14 0.7143 0.8333 0.8333 D 2 ..AACCCGGAtg wAcMmGGAAr.. 223 52 130 49 94 289 163 142.8571 115
positions_8nt_m5 1869_MA0421.1_JASPAR_CORE_2009_ positions_8nt_m5 1869_MA0421.1_JASPAR_CORE_2009_ 0.787 0.656 8.133 0.634 0.882 2.3620 0.89133 12 10 10 12 0.8333 0.8333 1.0000 D 0 dtAACCCGGA.. TTTACCCGGm 218 13 31 7 138 336 270 144.7143 116
positions_6nt_m1 6556_3dfv_C_3D-footprint_20130124_ positions_6nt_m1 6556_3dfv_C_3D-footprint_20130124_ 0.822 0.493 6.434 0.503 0.899 1.2114 0.87029 10 6 6 10 0.6000 0.6000 1.0000 D 0 rkATCA.... tTATcA 151 138 78 58 280 120 193 145.4286 117
positions_7nt_m3 5872_TFAP2A_DBD_2_HumanTF_1.0_ positions_7nt_m3 5872_TFAP2A_DBD_2_HumanTF_1.0_ 0.783 0.652 6.662 0.600 0.890 2.2014 0.89509 11 11 10 12 0.8333 0.9091 0.9091 D -1 sgCTCAGGCg. .GCCysAGGCw 236 16 71 15 119 325 240 146.0000 118
positions_8nt_m3 1782_MA0223.1_JASPAR_CORE_2009__MA0224.1_JASPAR_CORE_2009_ positions_8nt_m3 1782_MA0223.1_JASPAR_CORE_2009__MA0224.1_JASPAR_CORE_2009_ 0.828 0.483 4.811 0.459 0.905 1.3241 0.88376 12 7 7 12 0.5833 0.5833 1.0000 D 4 ....GTAATTc. bTAATTA 146 152 137 96 190 143 158 146.0000 119
positions_8nt_m3 5207_DLX2_DBD_HumanTF_1.0_ positions_8nt_m3 5207_DLX2_DBD_HumanTF_1.0_ 0.800 0.533 1.349 0.355 0.929 1.1347 0.90585 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw KTAATTRS 193 73 291 204 81 99 86 146.7143 120
positions_6nt_m1 1781_MA0222.1_JASPAR_CORE_2009_ positions_6nt_m1 1781_MA0222.1_JASPAR_CORE_2009_ 0.839 0.672 3.975 0.139 0.907 1.4936 0.89198 10 8 8 10 0.8000 0.8000 1.0000 R 1 .kATCAAAs. YRTCAAAA 120 12 174 248 134 190 151 147.0000 121
positions_7nt_m2 6360_1ytf_AC_3D-footprint_20130124_ positions_7nt_m2 6360_1ytf_AC_3D-footprint_20130124_ 0.853 0.427 8.224 0.397 0.907 1.3056 0.88458 11 10 7 14 0.5000 0.6364 0.7000 D -3 wwATATA.... ...TTATATA 103 274 29 164 180 137 149 148.0000 122
positions_7nt_m2 6359_1ytf_A_3D-footprint_20130124_ positions_7nt_m2 6359_1ytf_A_3D-footprint_20130124_ 0.853 0.427 8.224 0.397 0.907 1.3056 0.88458 11 10 7 14 0.5000 0.6364 0.7000 D -3 wwATATA.... ...TTATATA 103 274 29 164 180 137 149 148.0000 123
positions_8nt_m3 6061_1fjl_B_3D-footprint_20130124_ positions_8nt_m3 6061_1fjl_B_3D-footprint_20130124_ 0.850 0.496 1.285 0.076 0.933 0.9331 0.90242 12 7 7 12 0.5833 0.5833 1.0000 R 4 ....GTAATTc. GTAATNA 106 134 293 262 91 74 77 148.1429 124
dyads_m3 2661_MF0002.1_JASPAR_CORE_2009_ dyads_m3 2661_MF0002.1_JASPAR_CORE_2009_ 0.844 0.460 6.980 0.440 0.902 1.1805 0.87196 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....TGACnk TGACGT 113 190 55 121 271 113 179 148.8571 125
positions_8nt_m3 1742_MA0183.1_JASPAR_CORE_2009_ positions_8nt_m3 1742_MA0183.1_JASPAR_CORE_2009_ 0.859 0.463 0.422 -0.064 0.946 0.7494 0.91255 12 8 7 13 0.5385 0.5833 0.8750 R 5 .....TAATTcw TWATTMR. 96 184 308 302 58 52 43 149.0000 126
positions_8nt_m3 5219_Dlx2_DBD_HumanTF_1.0_ positions_8nt_m3 5219_Dlx2_DBD_HumanTF_1.0_ 0.797 0.532 2.534 0.396 0.916 1.3406 0.89766 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw WTAATTRS 199 75 223 168 110 150 120 149.2857 127
positions_8nt_m3 5504_LMX1B_full_HumanTF_1.0_ positions_8nt_m3 5504_LMX1B_full_HumanTF_1.0_ 0.788 0.525 2.120 0.395 0.920 1.2823 0.89991 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw KTAATTRR 215 83 234 171 103 131 112 149.8571 128
positions_6nt_m2 5966_1a3q_A_3D-footprint_20130124_ positions_6nt_m2 5966_1a3q_A_3D-footprint_20130124_ 0.967 0.403 0.084 -0.125 0.974 0.2559 0.92847 11 6 5 12 0.4167 0.4545 0.8333 R -1 TCCCC...... .TCCCC 9 344 346 318 13 9 10 149.8571 129
dyads_m2 4955_brk_DrosophilaTF_1.1_ dyads_m2 4955_brk_DrosophilaTF_1.1_ 0.835 0.449 7.137 0.470 0.901 1.3893 0.88093 13 7 7 13 0.5385 0.5385 1.0000 D 4 ....TGGCGAT.. TGGCGyY 135 223 54 85 206 170 183 150.8571 130
positions_8nt_m5 2420_MA0026.1_JASPAR_CORE_2009_ positions_8nt_m5 2420_MA0026.1_JASPAR_CORE_2009_ 0.814 0.475 3.947 0.447 0.908 1.2908 0.88524 12 7 7 12 0.5833 0.5833 1.0000 D 5 .....CCGGAtg CMGGAAr 160 165 176 113 172 132 144 151.7143 131
positions_8nt_m3 1731_MA0172.1_JASPAR_CORE_2009_ positions_8nt_m3 1731_MA0172.1_JASPAR_CORE_2009_ 0.866 0.505 2.681 0.219 0.909 1.2807 0.88568 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTAA 86 117 215 222 170 129 141 154.2857 132
positions_8nt_m3 5922_Vsx1_DBD_HumanTF_1.0_ positions_8nt_m3 5922_Vsx1_DBD_HumanTF_1.0_ 0.789 0.526 1.800 0.369 0.921 1.2595 0.90081 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 212 81 272 197 99 126 107 156.2857 133
positions_8nt_m5 4939_Eip74EF_DrosophilaTF_1.1_ positions_8nt_m5 4939_Eip74EF_DrosophilaTF_1.1_ 0.762 0.538 4.566 0.501 0.910 2.1607 0.91338 12 17 12 17 0.7059 1.0000 0.7059 D 0 dtAACCCGGAtg mgAAyCMGGAAr..... 306 69 149 60 55 320 136 156.4286 134
dyads_m4 6130_1imh_C_3D-footprint_20130124_ dyads_m4 6130_1imh_C_3D-footprint_20130124_ 0.918 0.417 0.358 -0.024 0.952 0.4771 0.90232 11 5 5 11 0.4545 0.4545 1.0000 R 1 .mTCCA..... TTCCA 29 307 313 295 93 24 34 156.4286 135
positions_7nt_m2 2713_PF0026.1_JASPAR_CORE_2009_ positions_7nt_m2 2713_PF0026.1_JASPAR_CORE_2009_ 0.799 0.581 8.896 0.530 0.879 1.9398 0.87689 11 8 8 11 0.7273 0.7273 1.0000 D 0 wwATATAA... TTAyrTAA 194 40 14 42 234 295 281 157.1429 136
dyads_m4 1711_MA0152.1_JASPAR_CORE_2009_ dyads_m4 1711_MA0152.1_JASPAR_CORE_2009_ 0.840 0.420 5.947 0.398 0.913 1.0500 0.87924 11 7 6 12 0.5000 0.5455 0.8571 D -1 ymTCCA..... .TTTCCA 118 290 100 162 220 85 128 157.5714 137
positions_8nt_m3 6262_1puf_A_3D-footprint_20130124_ positions_8nt_m3 6262_1puf_A_3D-footprint_20130124_ 0.847 0.494 1.663 0.070 0.923 1.0826 0.89490 12 7 7 12 0.5833 0.5833 1.0000 R 1 .sTGGTAA.... GTNGTAA 109 136 281 263 121 90 103 157.5714 138
dyads_m4 6074_1gji_A_3D-footprint_20130124_ dyads_m4 6074_1gji_A_3D-footprint_20130124_ 0.918 0.417 0.121 -0.063 0.952 0.4768 0.90235 11 5 5 11 0.4545 0.4545 1.0000 R 1 .mTCCA..... KTCCR 30 308 338 301 92 23 33 160.7143 139
dyads_m3 6353_1yo5_C_3D-footprint_20130124_ dyads_m3 6353_1yo5_C_3D-footprint_20130124_ 0.907 0.412 0.161 -0.111 0.957 0.4334 0.90690 11 5 5 11 0.4545 0.4545 1.0000 R 1 .wtCCT..... TTCCT 35 319 333 316 78 21 27 161.2857 140
positions_6nt_m2 2624_MA0397.1_JASPAR_CORE_2009_ positions_6nt_m2 2624_MA0397.1_JASPAR_CORE_2009_ 0.816 0.544 10.327 0.529 0.874 2.0121 0.87462 11 9 8 12 0.6667 0.7273 0.8889 D 3 ...CCTAGCGC gmTAGCGC. 156 61 6 43 255 307 302 161.4286 141
positions_8nt_m3 2710_PF0023.1_JASPAR_CORE_2009_ positions_8nt_m3 2710_PF0023.1_JASPAR_CORE_2009_ 0.875 0.437 4.855 0.428 0.904 1.1574 0.87321 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....TAATTc. TAATTA 78 252 135 132 262 105 169 161.8571 142
positions_8nt_m3 2645_MA0426.1_JASPAR_CORE_2009_ positions_8nt_m3 2645_MA0426.1_JASPAR_CORE_2009_ 0.875 0.437 4.855 0.428 0.904 1.1574 0.87321 12 6 6 12 0.5000 0.5000 1.0000 D 5 .....TAATTc. TAATTG 78 252 135 132 262 105 169 161.8571 143
positions_8nt_m3 1754_MA0195.1_JASPAR_CORE_2009_ positions_8nt_m3 1754_MA0195.1_JASPAR_CORE_2009_ 0.819 0.478 1.390 0.147 0.925 1.0442 0.89678 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTAR 152 161 290 242 113 84 95 162.4286 144
dyads_m3 6590_3g97_A_3D-footprint_20130124_ dyads_m3 6590_3g97_A_3D-footprint_20130124_ 0.881 0.400 0.210 0.032 0.959 0.4065 0.90984 11 5 5 11 0.4545 0.4545 1.0000 R 0 bwtCC...... GNACC 71 352 328 275 69 20 23 162.5714 145
positions_7nt_m1 1714_MA0155.1_JASPAR_CORE_2009_ positions_7nt_m1 1714_MA0155.1_JASPAR_CORE_2009_ 0.762 0.586 8.805 0.613 0.877 2.4653 0.88898 11 12 10 13 0.7692 0.9091 0.8333 D -2 vsAGGGGCCg. ..ymwGGGGkcr 305 32 15 8 152 344 289 163.5714 146
positions_6nt_m1 2350_CN0187.1_JASPAR_CORE_2009_ positions_6nt_m1 2350_CN0187.1_JASPAR_CORE_2009_ 0.856 0.482 3.941 0.026 0.913 1.5599 0.90187 10 15 9 16 0.5625 0.9000 0.6000 R -6 rkATCAAAs. ......AGAWCAAAG 99 155 178 278 95 214 127 163.7143 147
positions_7nt_m3 3725_UP00028_UniPROBE_20120919_ positions_7nt_m3 3725_UP00028_UniPROBE_20120919_ 0.765 0.561 6.752 0.492 0.890 2.4155 0.90009 11 15 11 15 0.7333 1.0000 0.7333 R -3 sgCTCAGGCgr ...SCCYSRGGSDW. 292 53 66 68 101 340 235 165.0000 148
dyads_m4 7686_UBIP1_f1_HOCOMOCO_v9_ dyads_m4 7686_UBIP1_f1_HOCOMOCO_v9_ 0.809 0.441 5.844 0.468 0.902 1.1757 0.87221 11 6 6 11 0.5455 0.5455 1.0000 D 4 ....CAGAcc. CAGArA 169 242 105 89 268 111 177 165.8571 149
positions_7nt_m3 1944_PB0088.1_JASPAR_CORE_2009_ positions_7nt_m3 1944_PB0088.1_JASPAR_CORE_2009_ 0.764 0.561 6.657 0.495 0.890 2.4195 0.90001 11 15 11 15 0.7333 1.0000 0.7333 R -3 sgCTCAGGCgr ...SCCYSRGGSDW. 294 54 72 63 102 341 238 166.2857 150
positions_6nt_m1 6387_2a07_K_3D-footprint_20130124_ positions_6nt_m1 6387_2a07_K_3D-footprint_20130124_ 0.894 0.447 0.438 -0.080 0.936 0.6385 0.88700 10 5 5 10 0.5000 0.5000 1.0000 R 4 ....CAAAs. CAAAT 52 229 307 303 166 41 71 167.0000 151
dyads_m3 5557_Meis2_DBD_1_HumanTF_1.0_ dyads_m3 5557_Meis2_DBD_1_HumanTF_1.0_ 0.787 0.501 6.750 0.483 0.891 1.5314 0.87499 11 7 7 11 0.6364 0.6364 1.0000 D 4 ....CTGACnk wTGACAg 220 126 67 73 247 204 233 167.1429 152
positions_6nt_m1 6753_6gat_A_3D-footprint_20130124_ positions_6nt_m1 6753_6gat_A_3D-footprint_20130124_ 0.803 0.482 4.741 0.485 0.895 1.2652 0.86744 10 6 6 10 0.6000 0.6000 1.0000 D 0 rkATCA.... CnATCA 180 153 142 70 289 127 211 167.4286 153
positions_7nt_m3 5878_TFAP2C_DBD_2_HumanTF_1.0_ positions_7nt_m3 5878_TFAP2C_DBD_2_HumanTF_1.0_ 0.762 0.635 6.738 0.583 0.879 2.4212 0.88997 11 11 10 12 0.8333 0.9091 0.9091 D -1 sgCTCAGGCg. .GCCtsAGGCw 303 18 68 18 144 342 280 167.5714 154
positions_8nt_m3 5683_PRRX2_full_HumanTF_1.0_ positions_8nt_m3 5683_PRRX2_full_HumanTF_1.0_ 0.779 0.519 1.708 0.366 0.919 1.2937 0.89947 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 248 96 279 199 105 134 115 168.0000 155
positions_7nt_m5 5978_1am9_AB_3D-footprint_20130124_ positions_7nt_m5 5978_1am9_AB_3D-footprint_20130124_ 0.772 0.702 12.376 0.660 0.858 2.8403 0.88083 11 10 10 11 0.9091 0.9091 1.0000 D 0 wkCACTCCAs. aTCACCCCAC 267 9 1 6 208 351 335 168.1429 156
positions_8nt_m4 7511_MZF1_f1_HOCOMOCO_v9_ positions_8nt_m4 7511_MZF1_f1_HOCOMOCO_v9_ 0.796 0.455 5.176 0.430 0.904 1.5385 0.89037 14 8 8 14 0.5714 0.5714 1.0000 D 5 .....GGGGrGAy. rkGGGGAw 204 206 124 129 141 208 166 168.2857 157
positions_8nt_m3 5909_UNCX_DBD_2_HumanTF_1.0_ positions_8nt_m3 5909_UNCX_DBD_2_HumanTF_1.0_ 0.775 0.517 1.855 0.387 0.916 1.3365 0.89782 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 261 100 267 176 108 148 119 168.4286 158
positions_8nt_m3 1737_MA0178.1_JASPAR_CORE_2009_ positions_8nt_m3 1737_MA0178.1_JASPAR_CORE_2009_ 0.830 0.484 1.880 0.183 0.914 1.2059 0.88907 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTAA 143 150 265 231 151 117 124 168.7143 159
positions_6nt_m1 4976_pan_DrosophilaTF_1.1_ positions_6nt_m1 4976_pan_DrosophilaTF_1.1_ 0.842 0.766 4.878 0.093 0.891 2.1806 0.89558 10 11 10 11 0.9091 1.0000 0.9091 R -1 rkATCAAAsd .AGATCAAAGG 116 3 134 259 118 324 229 169.0000 160
positions_8nt_m5 2601_MA0363.1_JASPAR_CORE_2009_ positions_8nt_m5 2601_MA0363.1_JASPAR_CORE_2009_ 0.768 0.576 6.819 0.548 0.881 2.1346 0.88521 12 9 9 12 0.7500 0.7500 1.0000 D 0 dtAACCCGG... rTTACCCkg 283 44 64 30 173 318 273 169.2857 161
positions_6nt_m1 2704_PF0017.1_JASPAR_CORE_2009_ positions_6nt_m1 2704_PF0017.1_JASPAR_CORE_2009_ 0.893 0.406 4.121 0.180 0.922 0.7778 0.87528 10 6 5 11 0.4545 0.5000 0.8333 R 5 .....AAAsd AAAGT. 54 335 167 233 245 58 105 171.0000 162
oligos_6nt_mkv3 108_MA0062.1_JASPAR_CORE_2009_ oligos_6nt_mkv3 108_MA0062.1_JASPAR_CORE_2009_ 0.809 0.462 8.128 0.420 0.892 1.7219 0.88401 12 10 8 14 0.5714 0.6667 0.8000 D -2 hkGAAGAG.... ..CGGAAGws 168 185 33 142 186 260 223 171.0000 163
positions_8nt_m4 5131_YufM_DBTBS_1.0_ positions_8nt_m4 5131_YufM_DBTBS_1.0_ 0.792 0.453 4.969 0.432 0.903 1.5534 0.88984 14 8 8 14 0.5714 0.5714 1.0000 D 3 ...AGGGGGrG... ArGrGdws 208 215 129 125 147 212 174 172.8571 164
dyads_m1 4955_brk_DrosophilaTF_1.1_ dyads_m1 4955_brk_DrosophilaTF_1.1_ 0.889 0.415 0.836 -0.106 0.935 0.9097 0.90365 15 7 7 15 0.4667 0.4667 1.0000 R 2 ..ATCGCCA...... RRCGCCA 60 315 297 313 88 70 74 173.8571 165
positions_6nt_m2 7264_STY1_ArabidopsisPBM_20140210_ positions_6nt_m2 7264_STY1_ArabidopsisPBM_20140210_ 0.773 0.702 9.744 0.689 0.848 3.0358 0.87680 11 10 10 11 0.9091 0.9091 1.0000 D 1 .CCCCTAGCGC cCCCTAGGGy 266 8 10 4 236 352 346 174.5714 166
positions_8nt_m3 5680_PRRX1_DBD_HumanTF_1.0_ positions_8nt_m3 5680_PRRX1_DBD_HumanTF_1.0_ 0.773 0.515 2.229 0.382 0.910 1.4375 0.89402 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 265 101 231 183 127 182 135 174.8571 167
positions_8nt_m2 7282_WRKY45_ArabidopsisPBM_20140210_ positions_8nt_m2 7282_WRKY45_ArabidopsisPBM_20140210_ 0.756 0.582 6.829 0.558 0.879 2.4265 0.88985 13 10 10 13 0.7692 0.7692 1.0000 D 2 ..TCGTTGGCTd. dCGTTGACya 332 38 63 25 146 343 282 175.5714 168
positions_8nt_m3 5561_Meox2_DBD_HumanTF_1.0_ positions_8nt_m3 5561_Meox2_DBD_HumanTF_1.0_ 0.753 0.502 2.668 0.474 0.906 1.5010 0.89171 12 8 8 12 0.6667 0.6667 1.0000 D 4 ....GTAATTcw kTAATkAc 341 123 216 82 135 194 152 177.5714 169
positions_8nt_m3 5681_PRRX1_full_1_HumanTF_1.0_ positions_8nt_m3 5681_PRRX1_full_1_HumanTF_1.0_ 0.767 0.511 2.072 0.383 0.911 1.4205 0.89466 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRG 285 108 238 180 123 177 133 177.7143 170
dyads_m3 6117_1hlz_A_3D-footprint_20130124_ dyads_m3 6117_1hlz_A_3D-footprint_20130124_ 0.810 0.442 4.810 0.406 0.902 1.1703 0.87251 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....TGACnk TGACCT 167 240 138 151 267 108 176 178.1429 171
positions_8nt_m3 1747_MA0188.1_JASPAR_CORE_2009_ positions_8nt_m3 1747_MA0188.1_JASPAR_CORE_2009_ 0.843 0.492 1.736 0.104 0.907 1.2992 0.88486 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTGS 115 142 276 258 175 135 147 178.2857 172
positions_7nt_m2 2814_PF0127.1_JASPAR_CORE_2009_ positions_7nt_m2 2814_PF0127.1_JASPAR_CORE_2009_ 0.783 0.570 9.022 0.518 0.868 2.1093 0.87163 11 8 8 11 0.7273 0.7273 1.0000 D 3 ...TATAAGkb wwTAAGGC 235 50 13 50 273 316 314 178.7143 173
positions_7nt_m3 5882_TFAP2C_full_3_HumanTF_1.0_ positions_7nt_m3 5882_TFAP2C_full_3_HumanTF_1.0_ 0.757 0.631 5.039 0.573 0.880 2.4054 0.89033 11 11 10 12 0.8333 0.9091 0.9091 D -1 sgCTCAGGCg. .GCCysAGGCw 325 19 126 22 143 339 279 179.0000 174
dyads_m4 6322_1svc_P_3D-footprint_20130124_ dyads_m4 6322_1svc_P_3D-footprint_20130124_ 0.805 0.402 5.817 0.403 0.909 1.0924 0.87682 11 7 6 12 0.5000 0.5455 0.8571 D -1 ymTCCA..... .nnTCCc 179 345 107 156 235 94 140 179.4286 175
positions_6nt_m1 1493_MA0298.1_JASPAR_CORE_2009_ positions_6nt_m1 1493_MA0298.1_JASPAR_CORE_2009_ 0.811 0.487 8.445 0.484 0.869 1.5694 0.85236 10 6 6 10 0.6000 0.6000 1.0000 D 0 rkATCA.... CTATCA 163 147 23 71 333 217 310 180.5714 176
dyads_m4 7623_SMAD4_si_HOCOMOCO_v9_ dyads_m4 7623_SMAD4_si_HOCOMOCO_v9_ 0.801 0.582 4.026 0.195 0.894 1.7021 0.88469 11 8 8 11 0.7273 0.7273 1.0000 R 1 .mTCCAGAc.. RKMCAGAC 190 35 170 225 179 252 215 180.8571 177
dyads_m3 5559_Meis3_DBD_1_HumanTF_1.0_ dyads_m3 5559_Meis3_DBD_1_HumanTF_1.0_ 0.778 0.495 5.733 0.476 0.890 1.5373 0.87475 11 7 7 11 0.6364 0.6364 1.0000 D 4 ....CTGACnk tTGACAg 252 135 111 79 250 206 236 181.2857 178
positions_8nt_m5 2487_MA0098.1_JASPAR_CORE_2009_ positions_8nt_m5 2487_MA0098.1_JASPAR_CORE_2009_ 0.841 0.421 0.238 -0.094 0.937 0.7502 0.89792 12 6 6 12 0.5000 0.5000 1.0000 R 6 ......CGGAtg MGGAWR 117 289 326 308 107 53 69 181.2857 179
positions_8nt_m3 5541_MSX1_full_HumanTF_1.0_ positions_8nt_m3 5541_MSX1_full_HumanTF_1.0_ 0.772 0.514 2.343 0.346 0.908 1.4751 0.89265 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw BTAATTRS 272 103 227 205 133 187 143 181.4286 180
positions_8nt_m3 5751_SHOX_DBD_HumanTF_1.0_ positions_8nt_m3 5751_SHOX_DBD_HumanTF_1.0_ 0.772 0.514 2.505 0.380 0.906 1.5099 0.89139 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 271 102 224 189 136 200 156 182.5714 181
positions_7nt_m1 7492_MBD2_si_HOCOMOCO_v9_ positions_7nt_m1 7492_MBD2_si_HOCOMOCO_v9_ 0.829 0.414 6.288 0.375 0.901 1.3797 0.88135 11 10 7 14 0.5000 0.6364 0.7000 D 4 ....GGGCCgg sSkCCGG... 145 316 81 192 204 167 180 183.5714 182
positions_7nt_m4 2547_MA0285.1_JASPAR_CORE_2009_ positions_7nt_m4 2547_MA0285.1_JASPAR_CORE_2009_ 0.766 0.492 5.956 0.478 0.890 1.9717 0.88968 14 9 9 14 0.6429 0.6429 1.0000 D 4 ....CCyAGCCAy. cwmmGCCmC 290 139 99 76 148 301 234 183.8571 183
positions_8nt_m3 5258_EN1_full_1_HumanTF_1.0_ positions_8nt_m3 5258_EN1_full_1_HumanTF_1.0_ 0.769 0.512 2.738 0.394 0.904 1.5389 0.89035 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw CTAATTRS 280 105 212 173 142 209 167 184.0000 184
dyads_m3 5047_ZmHOX2a_1__Athamap_20091028_ dyads_m3 5047_ZmHOX2a_1__Athamap_20091028_ 0.781 0.497 6.083 0.458 0.887 1.5777 0.87312 11 7 7 11 0.6364 0.6364 1.0000 D 1 .wtCCTGA... rTCCTaa 243 131 91 98 265 220 251 185.5714 185
positions_8nt_m3 5701_RAXL1_DBD_HumanTF_1.0_ positions_8nt_m3 5701_RAXL1_DBD_HumanTF_1.0_ 0.762 0.508 1.863 0.381 0.911 1.4182 0.89474 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 307 111 266 185 122 176 132 185.5714 186
dyads_m4 7622_SMAD3_f1_HOCOMOCO_v9_ dyads_m4 7622_SMAD3_f1_HOCOMOCO_v9_ 0.782 0.640 2.851 0.185 0.897 1.8482 0.89319 11 9 9 11 0.8182 0.8182 1.0000 R 1 .mTCCAGAcc. RGCCAGACA 241 17 207 229 131 279 203 186.7143 187
positions_6nt_m2 5080_Mta_DBTBS_1.0_ positions_6nt_m2 5080_Mta_DBTBS_1.0_ 0.818 0.460 8.656 0.449 0.874 2.2640 0.88178 11 14 9 16 0.5625 0.8182 0.6429 D -5 TCCCCTAGC.. .....TmCssTWGs 155 192 20 110 200 331 303 187.2857 188
dyads_m5 2742_PF0055.1_JASPAR_CORE_2009_ dyads_m5 2742_PF0055.1_JASPAR_CORE_2009_ 0.840 0.420 7.225 0.398 0.889 1.3310 0.86404 12 6 6 12 0.5000 0.5000 1.0000 D 6 ......TGGAwr TGGAAA 119 292 52 161 303 144 242 187.5714 189
positions_8nt_m4 2562_MA0306.1_JASPAR_CORE_2009_ positions_8nt_m4 2562_MA0306.1_JASPAR_CORE_2009_ 0.805 0.517 0.223 -0.161 0.921 1.4307 0.90603 14 9 9 14 0.6429 0.6429 1.0000 R 0 sgAAGGGGG..... WWWAGGGGW 178 99 327 346 80 180 108 188.2857 190
positions_8nt_m5 3995_UP00305_UniPROBE_20120919_ positions_8nt_m5 3995_UP00305_UniPROBE_20120919_ 0.797 0.461 1.660 0.050 0.925 1.6566 0.91726 12 18 11 19 0.5789 0.9167 0.6111 R -7 dtAACCCGGAt. .......KMSRCCCGRRW 201 187 282 267 44 241 98 188.5714 191
dyads_m2 2843_PF0156.1_JASPAR_CORE_2009_ dyads_m2 2843_PF0156.1_JASPAR_CORE_2009_ 0.839 0.444 0.356 -0.083 0.923 1.3825 0.90762 13 13 9 17 0.5294 0.6923 0.6923 R -4 mkCCTGGCG.... ....CMCCTGGYG 124 233 314 305 77 168 102 189.0000 192
positions_6nt_m2 2447_MA0056.1_JASPAR_CORE_2009_ positions_6nt_m2 2447_MA0056.1_JASPAR_CORE_2009_ 0.878 0.479 0.037 -0.132 0.914 1.0350 0.88010 11 6 6 11 0.5455 0.5455 1.0000 R 0 TCCCCT..... TCCCCR 73 160 349 325 211 82 125 189.2857 193
dyads_m3 2663_MF0004.1_JASPAR_CORE_2009_ dyads_m3 2663_MF0004.1_JASPAR_CORE_2009_ 0.823 0.449 1.215 0.029 0.919 0.9720 0.88381 11 6 6 11 0.5455 0.5455 1.0000 R 5 .....TGACnk TGACCY 150 224 294 277 189 79 116 189.8571 194
positions_8nt_m5 7373_ETS1_si_HOCOMOCO_v9_ positions_8nt_m5 7373_ETS1_si_HOCOMOCO_v9_ 0.784 0.422 3.525 0.396 0.908 1.2926 0.88515 12 8 7 13 0.5385 0.5833 0.8750 D 5 .....CCGGAtg cmGGAWg. 234 287 190 167 174 133 145 190.0000 195
positions_7nt_m2 6276_1qnb_A_3D-footprint_20130124_ positions_7nt_m2 6276_1qnb_A_3D-footprint_20130124_ 0.818 0.595 2.306 0.010 0.894 1.6977 0.88483 11 8 8 11 0.7273 0.7273 1.0000 R 3 ...TATAAGkb TATAAMTS 153 28 228 286 177 249 213 190.5714 196
positions_8nt_m3 1798_MA0240.1_JASPAR_CORE_2009_ positions_8nt_m3 1798_MA0240.1_JASPAR_CORE_2009_ 0.824 0.480 1.994 0.185 0.901 1.3834 0.88119 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw YAATTAA 149 158 243 230 205 169 181 190.7143 197
positions_7nt_m1 7480_KLF6_si_HOCOMOCO_v9_ positions_7nt_m1 7480_KLF6_si_HOCOMOCO_v9_ 0.785 0.499 5.483 0.493 0.882 1.6584 0.86991 11 7 7 11 0.6364 0.6364 1.0000 D 4 ....GGGCCgg GGGgCkG 231 128 114 67 282 242 272 190.8571 198
positions_8nt_m3 1759_MA0200.1_JASPAR_CORE_2009_ positions_8nt_m3 1759_MA0200.1_JASPAR_CORE_2009_ 0.787 0.459 4.735 0.449 0.891 1.5272 0.87517 12 7 7 12 0.5833 0.5833 1.0000 D 4 ....GTAATTc. mTAATTr 222 195 143 111 246 202 230 192.7143 199
dyads_m3 6425_2ff0_A_3D-footprint_20130124_ dyads_m3 6425_2ff0_A_3D-footprint_20130124_ 0.768 0.512 8.005 0.494 0.874 2.0105 0.87467 11 9 8 12 0.6667 0.7273 0.8889 D -1 bwtCCTGA... .GgCCCtGA 284 107 34 65 253 306 301 192.8571 200
positions_8nt_m3 1794_MA0236.1_JASPAR_CORE_2009_ positions_8nt_m3 1794_MA0236.1_JASPAR_CORE_2009_ 0.802 0.468 1.889 0.193 0.904 1.3389 0.88311 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTAR 186 171 264 227 193 149 164 193.4286 201
positions_6nt_m1 5975_1akh_A_3D-footprint_20130124_ positions_6nt_m1 5975_1akh_A_3D-footprint_20130124_ 0.839 0.457 0.757 -0.041 0.912 1.0614 0.87858 10 7 6 11 0.5455 0.6000 0.8571 R -1 rkATCA.... .ATNTCA 123 200 298 298 225 87 131 194.5714 202
dyads_m3 2729_PF0042.1_JASPAR_CORE_2009_ dyads_m3 2729_PF0042.1_JASPAR_CORE_2009_ 0.836 0.418 7.699 0.395 0.887 1.3587 0.86263 11 7 6 12 0.5000 0.5455 0.8571 D 5 .....TGACnk TGACAT. 129 301 40 169 309 159 256 194.7143 203
dyads_m3 2712_PF0025.1_JASPAR_CORE_2009_ dyads_m3 2712_PF0025.1_JASPAR_CORE_2009_ 0.836 0.418 7.699 0.395 0.887 1.3587 0.86263 11 7 6 12 0.5000 0.5455 0.8571 D 5 .....TGACnk TGACCT. 129 301 40 169 309 159 256 194.7143 204
dyads_m3 6405_2c9n_YZ_3D-footprint_20130124_ dyads_m3 6405_2c9n_YZ_3D-footprint_20130124_ 0.813 0.406 6.197 0.388 0.896 1.2445 0.86853 11 7 6 12 0.5000 0.5455 0.8571 D 5 .....TGACnk TGACTC. 162 334 85 175 284 122 205 195.2857 205
positions_8nt_m3 5687_Prrx2_DBD_HumanTF_1.0_ positions_8nt_m3 5687_Prrx2_DBD_HumanTF_1.0_ 0.758 0.505 2.634 0.408 0.900 1.5936 0.88842 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 323 116 219 150 155 223 184 195.7143 206
positions_7nt_m2 6246_1osl_A_3D-footprint_20130124_ positions_7nt_m2 6246_1osl_A_3D-footprint_20130124_ 0.839 0.489 0.367 -0.142 0.907 1.3021 0.88473 11 8 7 12 0.5833 0.6364 0.8750 R 4 ....ATAAGkb ATAAGAT. 122 143 311 334 178 136 148 196.0000 207
positions_7nt_m1 2711_PF0024.1_JASPAR_CORE_2009_ positions_7nt_m1 2711_PF0024.1_JASPAR_CORE_2009_ 0.798 0.466 7.679 0.428 0.878 1.7130 0.86779 11 8 7 12 0.5833 0.6364 0.8750 D -1 vsAGGGG.... .GGAGGrG 197 179 44 131 287 256 285 197.0000 208
dyads_m3 7587_PPARA_f1_HOCOMOCO_v9_ dyads_m3 7587_PPARA_f1_HOCOMOCO_v9_ 0.832 0.454 1.994 0.020 0.906 1.1313 0.87465 11 6 6 11 0.5455 0.5455 1.0000 R 5 .....TGACnk TGACCT 140 210 244 281 254 98 155 197.4286 209
positions_8nt_m5 6163_1k79_A_3D-footprint_20130124_ positions_8nt_m5 6163_1k79_A_3D-footprint_20130124_ 0.839 0.419 0.288 -0.128 0.924 0.9060 0.88782 12 6 6 12 0.5000 0.5000 1.0000 R 6 ......CGGAtg CGGAAA 121 294 320 321 160 69 99 197.7143 210
positions_8nt_m3 5564_Msx3_DBD_2_HumanTF_1.0_ positions_8nt_m3 5564_Msx3_DBD_2_HumanTF_1.0_ 0.769 0.513 2.776 0.356 0.899 1.6173 0.88759 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRS 279 104 211 203 162 231 195 197.8571 211
positions_8nt_m3 5817_Shox2_DBD_HumanTF_1.0_ positions_8nt_m3 5817_Shox2_DBD_HumanTF_1.0_ 0.761 0.507 2.625 0.380 0.900 1.6026 0.88810 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 309 112 220 186 156 226 185 199.1429 212
dyads_m3 6402_2c9l_YZ_3D-footprint_20130124_ dyads_m3 6402_2c9l_YZ_3D-footprint_20130124_ 0.807 0.403 5.940 0.381 0.899 1.2162 0.87003 11 7 6 12 0.5000 0.5455 0.8571 D 5 .....TGACnk TgACTc. 172 340 101 184 281 121 197 199.4286 213
positions_7nt_m3 7295_AP2A_f2_HOCOMOCO_v9_ positions_7nt_m3 7295_AP2A_f2_HOCOMOCO_v9_ 0.802 0.584 2.399 -0.007 0.893 1.7176 0.88416 11 8 8 11 0.7273 0.7273 1.0000 R 0 sgCTCAGG... SCCYCAGG 185 33 226 292 184 258 220 199.7143 214
positions_8nt_m3 6487_2p5l_D_3D-footprint_20130124_ positions_8nt_m3 6487_2p5l_D_3D-footprint_20130124_ 0.814 0.407 1.458 0.368 0.912 1.0555 0.87892 12 6 6 12 0.5000 0.5000 1.0000 D 6 ......AATTcw AATTCA 158 331 288 198 222 86 130 201.8571 215
positions_8nt_m3 1757_MA0198.1_JASPAR_CORE_2009__MA0455.1_JASPAR_CORE_2009_ positions_8nt_m3 1757_MA0198.1_JASPAR_CORE_2009__MA0455.1_JASPAR_CORE_2009_ 0.785 0.458 4.925 0.450 0.886 1.6018 0.87215 12 7 7 12 0.5833 0.5833 1.0000 D 4 ....GTAATTc. yTAATTr 226 197 131 109 269 225 260 202.4286 216
positions_8nt_m3 6133_1io4_C_3D-footprint_20130124_ positions_8nt_m3 6133_1io4_C_3D-footprint_20130124_ 0.845 0.422 0.126 -0.094 0.919 0.9673 0.88409 12 6 6 12 0.5000 0.5000 1.0000 R 0 dsTGGT...... TGTGGT 112 286 337 307 185 78 114 202.7143 217
positions_8nt_m3 5479_ISX_DBD_2_HumanTF_1.0_ positions_8nt_m3 5479_ISX_DBD_2_HumanTF_1.0_ 0.764 0.509 2.724 0.360 0.898 1.6297 0.88716 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRG 297 109 213 201 165 234 200 202.7143 218
dyads_m3 2487_MA0098.1_JASPAR_CORE_2009_ dyads_m3 2487_MA0098.1_JASPAR_CORE_2009_ 0.772 0.421 3.641 0.389 0.906 1.1268 0.87490 11 6 6 11 0.5455 0.5455 1.0000 D 0 bwtCCT..... ywTCCk 273 288 187 174 249 97 153 203.0000 219
positions_8nt_m3 5540_MSX1_DBD_2_HumanTF_1.0_ positions_8nt_m3 5540_MSX1_DBD_2_HumanTF_1.0_ 0.764 0.509 2.789 0.362 0.897 1.6417 0.88675 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRS 298 110 209 200 167 236 201 203.0000 220
dyads_m3 6062_1fos_EF_3D-footprint_20130124_ dyads_m3 6062_1fos_EF_3D-footprint_20130124_ 0.810 0.405 1.749 0.199 0.914 1.0366 0.88001 11 7 6 12 0.5000 0.5455 0.8571 R 5 .....TGACnk TGACTC. 165 336 275 224 213 83 126 203.1429 221
positions_8nt_m5 6164_1k7a_A_3D-footprint_20130124_ positions_8nt_m5 6164_1k7a_A_3D-footprint_20130124_ 0.835 0.418 0.293 -0.129 0.922 0.9322 0.88622 12 6 6 12 0.5000 0.5000 1.0000 R 6 ......CGGAtg CGGAAA 132 303 319 322 169 73 104 203.1429 222
positions_8nt_m3 1815_MA0257.1_JASPAR_CORE_2009_ positions_8nt_m3 1815_MA0257.1_JASPAR_CORE_2009_ 0.795 0.464 1.657 0.160 0.904 1.3488 0.88268 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAR 205 183 283 236 196 153 168 203.4286 223
positions_8nt_m3 5419_HOXA2_DBD_HumanTF_1.0_ positions_8nt_m3 5419_HOXA2_DBD_HumanTF_1.0_ 0.755 0.522 1.955 0.344 0.904 1.7250 0.89681 12 10 9 13 0.6923 0.7500 0.9000 R 3 ...GGTAATTcw GSTAATKRS. 338 91 253 206 112 263 165 204.0000 224
positions_8nt_m3 7342_DLX3_do_HOCOMOCO_v9_ positions_8nt_m3 7342_DLX3_do_HOCOMOCO_v9_ 0.757 0.466 4.436 0.469 0.891 1.7491 0.88310 12 9 8 13 0.6154 0.6667 0.8889 D 4 ....GTAATTcw mTAATTrs. 327 176 155 87 194 266 232 205.2857 225
positions_8nt_m3 1726_MA0167.1_JASPAR_CORE_2009_ positions_8nt_m3 1726_MA0167.1_JASPAR_CORE_2009_ 0.797 0.465 1.604 0.145 0.903 1.3562 0.88236 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTAR 200 180 285 246 198 158 172 205.5714 226
positions_8nt_m3 5750_SHOX2_DBD_HumanTF_1.0_ positions_8nt_m3 5750_SHOX2_DBD_HumanTF_1.0_ 0.756 0.504 2.496 0.380 0.900 1.6068 0.88796 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 334 120 225 190 157 227 186 205.5714 227
positions_8nt_m3 1753_MA0194.1_JASPAR_CORE_2009_ positions_8nt_m3 1753_MA0194.1_JASPAR_CORE_2009_ 0.836 0.488 2.968 0.227 0.887 1.5830 0.87291 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTAA 128 146 205 219 266 221 254 205.5714 228
positions_6nt_m1 1960_PB0105.1_JASPAR_CORE_2009_ positions_6nt_m1 1960_PB0105.1_JASPAR_CORE_2009_ 0.779 0.520 1.922 0.521 0.876 2.4860 0.88851 10 15 10 15 0.6667 1.0000 0.6667 D -4 rkATCAAAsd ....rtATcrdrty. 247 95 261 48 154 345 294 206.2857 229
dyads_m3 2485_MA0096.1_JASPAR_CORE_2009_ dyads_m3 2485_MA0096.1_JASPAR_CORE_2009_ 0.779 0.496 7.926 0.452 0.865 1.8893 0.86115 11 7 7 11 0.6364 0.6364 1.0000 D 4 ....CTGACnk mTGACGT 246 133 36 106 316 287 320 206.2857 230
positions_8nt_m5 5368_GCM2_DBD_HumanTF_1.0_ positions_8nt_m5 5368_GCM2_DBD_HumanTF_1.0_ 0.753 0.627 2.654 0.276 0.893 2.1413 0.89653 12 10 10 12 0.8333 0.8333 1.0000 R 2 ..AACCCGGAtg YRCCCGCATV 343 20 217 213 114 319 219 206.4286 231
positions_8nt_m5 2690_PF0003.1_JASPAR_CORE_2009_ positions_8nt_m5 2690_PF0003.1_JASPAR_CORE_2009_ 0.818 0.440 4.987 0.413 0.884 1.6263 0.87118 12 8 7 13 0.5385 0.5833 0.8750 D 5 .....CCGGAtg SCGGAAG. 154 244 127 148 277 233 265 206.8571 232
positions_6nt_m2 2609_MA0372.1_JASPAR_CORE_2009_ positions_6nt_m2 2609_MA0372.1_JASPAR_CORE_2009_ 0.757 0.551 10.156 0.538 0.836 2.6179 0.85699 11 8 8 11 0.7273 0.7273 1.0000 D 0 TCCCCTAG... aCCCCTwA 324 57 7 40 324 349 350 207.2857 233
positions_8nt_m3 1809_MA0251.1_JASPAR_CORE_2009_ positions_8nt_m3 1809_MA0251.1_JASPAR_CORE_2009_ 0.798 0.466 1.828 0.156 0.899 1.4119 0.87997 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw YAATTAR 196 178 269 237 214 174 192 208.5714 234
positions_8nt_m3 1750_MA0191.1_JASPAR_CORE_2009_ positions_8nt_m3 1750_MA0191.1_JASPAR_CORE_2009_ 0.791 0.462 1.822 0.194 0.899 1.4086 0.88011 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw YMATTAA 209 186 270 226 210 172 189 208.8571 235
positions_8nt_m3 5171_BSX_DBD_HumanTF_1.0_ positions_8nt_m3 5171_BSX_DBD_HumanTF_1.0_ 0.751 0.501 1.938 0.282 0.903 1.5520 0.88989 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw BTAATKRS 348 125 255 211 145 211 173 209.7143 236
positions_8nt_m3 5640_PDX1_DBD_2_HumanTF_1.0_ positions_8nt_m3 5640_PDX1_DBD_2_HumanTF_1.0_ 0.751 0.501 2.778 0.394 0.895 1.6816 0.88538 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATKRS 347 124 210 172 171 245 209 211.1429 237
positions_8nt_m3 5480_ISX_full_HumanTF_1.0_ positions_8nt_m3 5480_ISX_full_HumanTF_1.0_ 0.760 0.507 3.179 0.385 0.892 1.7249 0.88392 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTRR 316 113 202 179 187 262 225 212.0000 238
positions_8nt_m3 7572_PDX1_do_HOCOMOCO_v9_ positions_8nt_m3 7572_PDX1_do_HOCOMOCO_v9_ 0.757 0.504 4.070 0.483 0.880 1.9197 0.87753 12 8 8 12 0.6667 0.6667 1.0000 D 4 ....GTAATTcw STmATTAG 331 118 168 72 230 292 277 212.5714 239
positions_8nt_m3 1736_MA0177.1_JASPAR_CORE_2009_ positions_8nt_m3 1736_MA0177.1_JASPAR_CORE_2009_ 0.799 0.466 1.804 0.155 0.897 1.4372 0.87890 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAR 195 177 271 238 224 181 202 212.5714 240
positions_7nt_m5 2512_MA0130.1_JASPAR_CORE_2009_ positions_7nt_m5 2512_MA0130.1_JASPAR_CORE_2009_ 0.800 0.437 6.779 0.396 0.875 1.4957 0.85587 11 6 6 11 0.5455 0.5455 1.0000 D 4 ....CTCCAs. mTCCAC 191 255 65 166 327 193 296 213.2857 241
oligos_6nt_mkv3 6730_4b06_A_3D-footprint_20130124_ oligos_6nt_mkv3 6730_4b06_A_3D-footprint_20130124_ 0.856 0.428 1.961 0.016 0.899 1.2083 0.87045 12 6 6 12 0.5000 0.5000 1.0000 R 0 hkGAAG...... CGGAAG 100 273 250 283 279 119 190 213.4286 242
dyads_m4 2553_MA0292.1_JASPAR_CORE_2009_ dyads_m4 2553_MA0292.1_JASPAR_CORE_2009_ 0.765 0.487 6.968 0.500 0.862 1.9327 0.85957 11 7 7 11 0.6364 0.6364 1.0000 D 1 .mTCCAGA... hTCCGGA 293 148 56 62 319 294 327 214.1429 243
positions_8nt_m3 5162_BARX1_DBD_2_HumanTF_1.0_ positions_8nt_m3 5162_BARX1_DBD_2_HumanTF_1.0_ 0.750 0.500 2.060 0.282 0.900 1.6070 0.88795 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATKGB 352 127 239 212 158 228 187 214.7143 244
positions_8nt_m3 1788_MA0230.1_JASPAR_CORE_2009_ positions_8nt_m3 1788_MA0230.1_JASPAR_CORE_2009_ 0.801 0.467 2.268 0.219 0.890 1.5379 0.87473 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAA 189 173 229 221 252 207 237 215.4286 245
positions_8nt_m5 4969_gcm_DrosophilaTF_1.1_ positions_8nt_m5 4969_gcm_DrosophilaTF_1.1_ 0.788 0.525 3.378 0.245 0.880 1.9180 0.87759 12 8 8 12 0.6667 0.6667 1.0000 R 3 ...ACCCGGAt. RCCCGCAT 216 84 197 216 229 291 276 215.5714 246
positions_8nt_m3 5543_MSX2_DBD_2_HumanTF_1.0_ positions_8nt_m3 5543_MSX2_DBD_2_HumanTF_1.0_ 0.758 0.505 2.642 0.326 0.893 1.7068 0.88452 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GTAATTcw YTAATTGG 321 114 218 208 182 254 216 216.1429 247
dyads_m3 7381_FOSB_f1_HOCOMOCO_v9_ dyads_m3 7381_FOSB_f1_HOCOMOCO_v9_ 0.792 0.427 3.681 0.232 0.895 1.4753 0.87731 11 9 7 13 0.5385 0.6364 0.7778 R 4 ....CTGACnk MTGACTC.. 207 276 185 217 233 188 210 216.5714 248
positions_8nt_m5 5365_GCM1_DBD_HumanTF_1.0_ positions_8nt_m5 5365_GCM1_DBD_HumanTF_1.0_ 0.752 0.627 2.703 0.265 0.886 2.2852 0.89311 12 10 10 12 0.8333 0.8333 1.0000 R 2 ..AACCCGGAtg TACCCGCATR 345 21 214 214 132 332 259 216.7143 249
positions_6nt_m1 6070_1gau_A_3D-footprint_20130124_ positions_6nt_m1 6070_1gau_A_3D-footprint_20130124_ 0.803 0.402 5.895 0.400 0.881 1.1912 0.84565 10 5 5 10 0.5000 0.5000 1.0000 D 1 .kATCA.... tATCt 181 347 103 159 347 115 274 218.0000 250
dyads_m3 2602_MA0364.1_JASPAR_CORE_2009_ dyads_m3 2602_MA0364.1_JASPAR_CORE_2009_ 0.764 0.486 7.566 0.462 0.861 1.9460 0.85908 11 7 7 11 0.6364 0.6364 1.0000 D 1 .wtCCTGA... CCCCTGa 295 149 46 95 321 297 330 219.0000 251
oligos_6nt_mkv3 3027_POL008.1_JASPAR_CORE_2009_ oligos_6nt_mkv3 3027_POL008.1_JASPAR_CORE_2009_ 0.858 0.429 0.193 -0.128 0.905 1.1349 0.87445 12 6 6 12 0.5000 0.5000 1.0000 R 1 .kGAAGA..... SGAAGC 97 270 330 320 258 100 159 219.1429 252
positions_7nt_m1 7268_TCP23_ArabidopsisPBM_20140210_ positions_7nt_m1 7268_TCP23_ArabidopsisPBM_20140210_ 0.771 0.474 8.646 0.452 0.856 2.2962 0.86606 11 10 8 13 0.6154 0.7273 0.8000 D 3 ...GGGGCCgg GGGGCCCA.. 275 166 22 105 296 333 337 219.1429 253
positions_7nt_m1 7202_ATERF1_ArabidopsisPBM_20140210_ positions_7nt_m1 7202_ATERF1_ArabidopsisPBM_20140210_ 0.775 0.477 4.171 0.464 0.874 2.0084 0.87474 11 10 8 13 0.6154 0.7273 0.8000 D 3 ...GGGGCCgg GGcGsCGs.. 260 162 165 94 251 305 299 219.4286 254
dyads_m3 1696_MA0129.1_JASPAR_CORE_2009_ dyads_m3 1696_MA0129.1_JASPAR_CORE_2009_ 0.835 0.418 0.300 -0.095 0.908 1.0987 0.87647 11 7 6 12 0.5000 0.5455 0.8571 R 5 .....TGACnk TGACGT. 133 305 317 310 239 95 142 220.1429 255
dyads_m3 7604_RARG_f1_HOCOMOCO_v9_ dyads_m3 7604_RARG_f1_HOCOMOCO_v9_ 0.815 0.445 1.928 0.024 0.895 1.2559 0.86793 11 6 6 11 0.5455 0.5455 1.0000 R 5 .....TGACnk TGAMCT 157 232 259 280 285 125 207 220.7143 256
positions_7nt_m3 7297_AP2C_f1_HOCOMOCO_v9_ positions_7nt_m3 7297_AP2C_f1_HOCOMOCO_v9_ 0.785 0.571 2.819 -0.001 0.883 1.8768 0.87891 11 8 8 11 0.7273 0.7273 1.0000 R 0 sgCTCAGG... SCCYCAGG 225 49 208 289 223 285 269 221.1429 257
positions_7nt_m1 7266_TCP15_ArabidopsisPBM_20140210_ positions_7nt_m1 7266_TCP15_ArabidopsisPBM_20140210_ 0.768 0.473 8.667 0.447 0.855 2.3189 0.86540 11 10 8 13 0.6154 0.7273 0.8000 D 3 ...GGGGCCgg GGGGCCCA.. 281 168 19 112 298 334 338 221.4286 258
positions_6nt_m1 6264_1puf_B_3D-footprint_20130124_ positions_6nt_m1 6264_1puf_B_3D-footprint_20130124_ 0.828 0.497 0.297 -0.103 0.893 1.2819 0.86657 10 6 6 10 0.6000 0.6000 1.0000 R 1 .kATCAA... TATCAT 147 132 318 312 294 130 218 221.5714 259
positions_8nt_m5 2614_MA0380.1_JASPAR_CORE_2009_ positions_8nt_m5 2614_MA0380.1_JASPAR_CORE_2009_ 0.776 0.453 2.226 0.151 0.895 1.4698 0.87753 12 7 7 12 0.5833 0.5833 1.0000 R 4 ....CCCGGAt. YCCGGRR 256 214 232 241 231 186 208 224.0000 260
dyads_m3 6152_1jnm_B_3D-footprint_20130124_ dyads_m3 6152_1jnm_B_3D-footprint_20130124_ 0.832 0.454 0.120 -0.095 0.901 1.1875 0.87157 11 6 6 11 0.5455 0.5455 1.0000 R 4 ....CTGACn. RTGACS 141 211 339 309 275 114 182 224.4286 261
positions_6nt_m1 2204_CN0041.1_JASPAR_CORE_2009_ positions_6nt_m1 2204_CN0041.1_JASPAR_CORE_2009_ 0.803 0.425 4.621 0.153 0.887 2.0356 0.88790 10 16 9 17 0.5294 0.9000 0.5625 R -7 rkATCAAAs. .......ATTTCAAAG 184 280 147 239 159 308 255 224.5714 262
dyads_m4 2532_MA0266.1_JASPAR_CORE_2009_ dyads_m4 2532_MA0266.1_JASPAR_CORE_2009_ 0.757 0.482 7.967 0.486 0.850 2.0954 0.85378 11 7 7 11 0.6364 0.6364 1.0000 D 1 .mTCCAGA... sTCTAGA 329 154 35 69 330 313 344 224.8571 263
dyads_m3 7373_ETS1_si_HOCOMOCO_v9_ dyads_m3 7373_ETS1_si_HOCOMOCO_v9_ 0.791 0.461 0.101 -0.162 0.906 1.3213 0.88388 11 8 7 12 0.5833 0.6364 0.8750 R -1 bwtCCTG.... .CWTCCKG 210 188 342 347 188 142 157 224.8571 264
positions_8nt_m3 1799_MA0241.1_JASPAR_CORE_2009_ positions_8nt_m3 1799_MA0241.1_JASPAR_CORE_2009_ 0.797 0.465 1.786 0.127 0.892 1.5080 0.87595 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TAATTAR 203 181 273 255 242 198 224 225.1429 265
positions_7nt_m1 2693_PF0006.1_JASPAR_CORE_2009_ positions_7nt_m1 2693_PF0006.1_JASPAR_CORE_2009_ 0.761 0.484 8.413 0.478 0.842 2.2097 0.84984 11 7 7 11 0.6364 0.6364 1.0000 D 4 ....GGGCCgg GGGCGGG 313 151 25 77 337 327 347 225.2857 266
positions_6nt_m1 2219_CN0056.1_JASPAR_CORE_2009_ positions_6nt_m1 2219_CN0056.1_JASPAR_CORE_2009_ 0.760 0.456 10.449 0.469 0.853 2.6495 0.87211 10 14 9 15 0.6000 0.9000 0.6429 D -5 rkATCAAAs. .....wAATCAmAG 318 204 5 88 270 350 343 225.4286 267
dyads_m4 2742_PF0055.1_JASPAR_CORE_2009_ dyads_m4 2742_PF0055.1_JASPAR_CORE_2009_ 0.836 0.456 1.961 0.003 0.887 1.3557 0.86278 11 6 6 11 0.5455 0.5455 1.0000 R 0 ymTCCA..... TTTCCA 126 202 251 287 308 156 253 226.1429 268
positions_8nt_m3 1765_MA0206.1_JASPAR_CORE_2009_ positions_8nt_m3 1765_MA0206.1_JASPAR_CORE_2009_ 0.779 0.454 2.050 0.224 0.892 1.5136 0.87572 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAA 249 208 240 220 243 201 227 226.8571 269
positions_7nt_m5 7286_ZAT18_ArabidopsisPBM_20140210_ positions_7nt_m5 7286_ZAT18_ArabidopsisPBM_20140210_ 0.803 0.401 3.249 0.357 0.893 1.5048 0.87608 11 10 7 14 0.5000 0.6364 0.7000 R -3 wkCACTC.... ...TGCACTH 183 350 200 202 240 195 221 227.2857 270
dyads_m4 2487_MA0098.1_JASPAR_CORE_2009_ dyads_m4 2487_MA0098.1_JASPAR_CORE_2009_ 0.761 0.415 5.191 0.426 0.887 1.3546 0.86284 11 6 6 11 0.5455 0.5455 1.0000 D 0 ymTCCA..... ywTCCk 308 312 123 135 307 154 252 227.2857 271
dyads_m3 7600_RARA_f1_HOCOMOCO_v9_ dyads_m3 7600_RARA_f1_HOCOMOCO_v9_ 0.836 0.456 1.930 -0.003 0.887 1.3587 0.86263 11 6 6 11 0.5455 0.5455 1.0000 R 5 .....TGACnk TGACCT 129 203 256 290 309 159 256 228.8571 272
positions_8nt_m3 1768_MA0209.1_JASPAR_CORE_2009_ positions_8nt_m3 1768_MA0209.1_JASPAR_CORE_2009_ 0.782 0.456 1.929 0.145 0.893 1.5049 0.87608 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAR 238 201 258 247 241 196 222 229.0000 273
dyads_m3 1715_MA0156.1_JASPAR_CORE_2009_ dyads_m3 1715_MA0156.1_JASPAR_CORE_2009_ 0.800 0.467 0.042 -0.156 0.902 1.3765 0.88149 11 8 7 12 0.5833 0.6364 0.8750 R -1 bwtCCTG.... .YTTCCTG 192 175 348 345 203 166 178 229.5714 274
positions_6nt_m1 5048_ZmHOX2a_2__Athamap_20091028_ positions_6nt_m1 5048_ZmHOX2a_2__Athamap_20091028_ 0.825 0.450 0.314 -0.166 0.899 1.2073 0.87051 10 7 6 11 0.5455 0.6000 0.8571 R -1 rkATCA.... .MGATCA 148 220 316 348 278 118 188 230.8571 275
positions_8nt_m5 2649_MA0430.1_JASPAR_CORE_2009_ positions_8nt_m5 2649_MA0430.1_JASPAR_CORE_2009_ 0.771 0.415 4.167 0.400 0.890 1.5406 0.87462 12 8 7 13 0.5385 0.5833 0.8750 D 5 .....CCGGAtg yCGGAGT. 274 313 166 158 256 210 239 230.8571 276
positions_8nt_m3 1743_MA0184.1_JASPAR_CORE_2009_ positions_8nt_m3 1743_MA0184.1_JASPAR_CORE_2009_ 0.784 0.457 1.466 0.108 0.893 1.4942 0.87652 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw YAATTAR 233 199 287 257 238 191 217 231.7143 277
positions_6nt_m1 7300_ARI3A_f1_HOCOMOCO_v9_ positions_6nt_m1 7300_ARI3A_f1_HOCOMOCO_v9_ 0.764 0.459 8.757 0.457 0.829 2.0579 0.83094 10 6 6 10 0.6000 0.6000 1.0000 D 2 ..ATCAAA.. ATTAAA 296 196 16 100 352 311 352 231.8571 278
positions_8nt_m3 1748_MA0189.1_JASPAR_CORE_2009_ positions_8nt_m3 1748_MA0189.1_JASPAR_CORE_2009_ 0.766 0.447 1.647 0.163 0.899 1.4180 0.87971 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAR 289 230 284 235 215 175 196 232.0000 279
dyads_m3 7564_PAX2_si_HOCOMOCO_v9_ dyads_m3 7564_PAX2_si_HOCOMOCO_v9_ 0.789 0.430 5.884 0.438 0.858 1.6986 0.84641 11 6 6 11 0.5455 0.5455 1.0000 D 3 ...CCTGAC.. mrTGAC 211 267 104 122 345 250 332 233.0000 280
positions_8nt_m3 1796_MA0238.1_JASPAR_CORE_2009_ positions_8nt_m3 1796_MA0238.1_JASPAR_CORE_2009_ 0.787 0.459 1.927 0.164 0.888 1.5746 0.87324 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAR 221 194 260 234 261 218 250 234.0000 281
positions_6nt_m1 2563_MA0307.1_JASPAR_CORE_2009_ positions_6nt_m1 2563_MA0307.1_JASPAR_CORE_2009_ 0.831 0.416 0.488 -0.142 0.905 0.9524 0.86199 10 5 5 10 0.5000 0.5000 1.0000 R 0 rkATC..... YWATC 142 311 303 333 312 75 162 234.0000 282
positions_8nt_m5 5356_GABPA_full_HumanTF_1.0_ positions_8nt_m5 5356_GABPA_full_HumanTF_1.0_ 0.762 0.436 5.246 0.416 0.879 1.9432 0.87679 12 10 8 14 0.5714 0.6667 0.8000 D 4 ....CCCGGAtg aCCGGAAG.. 301 257 121 144 237 296 283 234.1429 283
positions_8nt_m3 1738_MA0179.1_JASPAR_CORE_2009_ positions_8nt_m3 1738_MA0179.1_JASPAR_CORE_2009_ 0.761 0.444 4.700 0.444 0.877 1.7229 0.86741 12 7 7 12 0.5833 0.5833 1.0000 D 4 ....GTAATTc. yTAATTr 311 234 144 118 290 261 287 235.0000 284
positions_8nt_m4 7481_KLF8_f1_HOCOMOCO_v9_ positions_8nt_m4 7481_KLF8_f1_HOCOMOCO_v9_ 0.752 0.430 4.425 0.442 0.884 1.8592 0.87948 14 8 8 14 0.5714 0.5714 1.0000 D 3 ...AGGGGGrG... mGkGkGTG 344 269 156 119 218 281 266 236.1429 285
dyads_m3 7487_MAFG_si_HOCOMOCO_v9_ dyads_m3 7487_MAFG_si_HOCOMOCO_v9_ 0.769 0.419 7.319 0.429 0.862 1.6527 0.84850 11 6 6 11 0.5455 0.5455 1.0000 D 4 ....CTGACn. ATGACt 277 293 48 130 342 239 326 236.4286 286
oligos_6nt_mkv3 2554_MA0293.1_JASPAR_CORE_2009_ oligos_6nt_mkv3 2554_MA0293.1_JASPAR_CORE_2009_ 0.774 0.413 4.982 0.387 0.883 1.8649 0.87929 12 11 8 15 0.5333 0.6667 0.7273 D 4 ....AGAGATcd mmAGATCt... 264 318 128 177 219 282 267 236.4286 287
positions_8nt_m3 1779_MA0220.1_JASPAR_CORE_2009_ positions_8nt_m3 1779_MA0220.1_JASPAR_CORE_2009_ 0.760 0.443 4.696 0.445 0.876 1.7305 0.86712 12 7 7 12 0.5833 0.5833 1.0000 D 4 ....GTAATTc. yTAATTr 317 236 145 115 292 265 292 237.4286 288
dyads_m3 7678_THA_f1_HOCOMOCO_v9_ dyads_m3 7678_THA_f1_HOCOMOCO_v9_ 0.805 0.434 0.279 -0.141 0.899 1.4104 0.88003 11 9 7 13 0.5385 0.6364 0.7778 R 4 ....CTGACnk STGACCT.. 175 259 322 332 212 173 191 237.7143 289
positions_8nt_m5 7361_ELK3_f1_HOCOMOCO_v9_ positions_8nt_m5 7361_ELK3_f1_HOCOMOCO_v9_ 0.756 0.403 4.254 0.373 0.894 1.6976 0.88484 12 11 8 15 0.5333 0.6667 0.7273 D 4 ....CCCGGAtg mChGGAAr... 333 341 161 194 176 248 212 237.8571 290
dyads_m3 2536_MA0271.1_JASPAR_CORE_2009_ dyads_m3 2536_MA0271.1_JASPAR_CORE_2009_ 0.761 0.415 6.195 0.403 0.875 1.4953 0.85589 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....TGACnk wGACkC 310 314 86 153 326 192 295 239.4286 291
oligos_6nt_mkv3 6697_3rkq_B_3D-footprint_20130124_ oligos_6nt_mkv3 6697_3rkq_B_3D-footprint_20130124_ 0.760 0.444 6.887 0.445 0.860 1.9549 0.85876 12 7 7 12 0.5833 0.5833 1.0000 D 1 .kGAAGAG.... TcaAGAG 314 235 61 116 322 298 331 239.5714 292
positions_7nt_m2 6270_1qn5_A_3D-footprint_20130124_ positions_7nt_m2 6270_1qn5_A_3D-footprint_20130124_ 0.797 0.580 0.345 -0.179 0.883 1.8701 0.87913 11 8 8 11 0.7273 0.7273 1.0000 R 3 ...TATAAGkb TATAAGAG 202 41 315 350 221 283 268 240.0000 293
positions_7nt_m2 6724_4aij_AB_3D-footprint_20130124_ positions_7nt_m2 6724_4aij_AB_3D-footprint_20130124_ 0.803 0.401 1.286 0.138 0.897 1.6531 0.88636 11 13 8 16 0.5000 0.7273 0.6154 R 3 ...TATAAGkb TATANNNN..... 182 348 292 249 168 240 204 240.4286 294
positions_8nt_m3 1740_MA0181.1_JASPAR_CORE_2009_ positions_8nt_m3 1740_MA0181.1_JASPAR_CORE_2009_ 0.772 0.450 1.953 0.185 0.889 1.5583 0.87390 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw YAATTAR 270 219 254 228 259 213 244 241.0000 295
positions_7nt_m2 2738_PF0051.1_JASPAR_CORE_2009_ positions_7nt_m2 2738_PF0051.1_JASPAR_CORE_2009_ 0.778 0.424 9.609 0.424 0.833 2.0000 0.83333 11 6 6 11 0.5455 0.5455 1.0000 D 3 ...TATAAG.. TATAAA 254 283 11 136 351 303 351 241.2857 296
positions_7nt_m2 2595_MA0356.1_JASPAR_CORE_2009_ positions_7nt_m2 2595_MA0356.1_JASPAR_CORE_2009_ 0.769 0.419 3.043 0.146 0.891 1.3114 0.86504 11 6 6 11 0.5455 0.5455 1.0000 R 0 wwATAT..... WAWTAW 278 295 204 244 300 139 231 241.5714 297
positions_8nt_m4 2642_MA0423.1_JASPAR_CORE_2009_ positions_8nt_m4 2642_MA0423.1_JASPAR_CORE_2009_ 0.768 0.494 0.252 -0.179 0.899 1.8259 0.89383 14 9 9 14 0.6429 0.6429 1.0000 R 0 sgAAGGGGG..... DAWAGGGGK 282 137 324 351 128 276 198 242.2857 298
positions_7nt_m1 2562_MA0306.1_JASPAR_CORE_2009_ positions_7nt_m1 2562_MA0306.1_JASPAR_CORE_2009_ 0.785 0.524 0.470 -0.128 0.884 1.8567 0.87956 11 9 8 12 0.6667 0.7273 0.8889 R -1 vsAGGGGC... .WWAGGGGW 227 89 304 319 216 280 264 242.7143 299
positions_7nt_m3 6517_2wbs_A_3D-footprint_20130124_ positions_7nt_m3 6517_2wbs_A_3D-footprint_20130124_ 0.766 0.418 5.958 0.398 0.870 1.5602 0.85279 11 6 6 11 0.5455 0.5455 1.0000 D 5 .....AGGCgr aGGCGC 287 300 98 163 332 215 309 243.4286 300
positions_8nt_m3 1808_MA0250.1_JASPAR_CORE_2009_ positions_8nt_m3 1808_MA0250.1_JASPAR_CORE_2009_ 0.757 0.442 4.781 0.432 0.871 1.8100 0.86410 12 7 7 12 0.5833 0.5833 1.0000 D 4 ....GTAATTc. tTAATTr 326 239 140 127 302 274 308 245.1429 301
positions_7nt_m2 6236_1nvp_AC_3D-footprint_20130124_ positions_7nt_m2 6236_1nvp_AC_3D-footprint_20130124_ 0.761 0.489 4.213 0.209 0.867 2.3979 0.87834 11 12 9 14 0.6429 0.8182 0.7500 R -3 wwATATAAG.. ...NTATAAAAG 312 144 162 223 226 338 316 245.8571 302
positions_6nt_m1 2249_CN0086.1_JASPAR_CORE_2009_ positions_6nt_m1 2249_CN0086.1_JASPAR_CORE_2009_ 0.780 0.439 4.385 0.081 0.877 2.2165 0.88303 10 15 9 16 0.5625 0.9000 0.6000 R 1 .kATCAAAsd AATCAAARG...... 244 247 158 261 195 328 288 245.8571 303
oligos_6nt_mkv3 6749_4hn6_A_3D-footprint_20130124_ oligos_6nt_mkv3 6749_4hn6_A_3D-footprint_20130124_ 0.861 0.431 0.148 -0.136 0.888 1.3422 0.86346 12 6 6 12 0.5000 0.5000 1.0000 R 2 ..GAAGAG.... GNAGAG 91 265 334 328 305 151 247 245.8571 304
dyads_m1 1772_MA0213.1_JASPAR_CORE_2009_ dyads_m1 1772_MA0213.1_JASPAR_CORE_2009_ 0.784 0.418 3.376 0.093 0.885 1.8369 0.88021 15 8 8 15 0.5333 0.5333 1.0000 R 2 ..ATCGCCAG..... RGCGCCRS 232 298 198 260 209 278 262 248.1429 305
positions_7nt_m1 2642_MA0423.1_JASPAR_CORE_2009_ positions_7nt_m1 2642_MA0423.1_JASPAR_CORE_2009_ 0.785 0.524 0.455 -0.144 0.880 1.9150 0.87768 11 9 8 12 0.6667 0.7273 0.8889 R -1 vsAGGGGC... .AWAGGGGK 224 88 306 336 228 290 275 249.5714 306
dyads_m3 7372_ESR2_si_HOCOMOCO_v9_ dyads_m3 7372_ESR2_si_HOCOMOCO_v9_ 0.811 0.442 0.165 -0.151 0.889 1.3335 0.86391 11 6 6 11 0.5455 0.5455 1.0000 R 4 ....CTGACn. STGACC 164 237 332 341 304 147 243 252.5714 307
positions_6nt_m1 2431_MA0037.1_JASPAR_CORE_2009_ positions_6nt_m1 2431_MA0037.1_JASPAR_CORE_2009_ 0.759 0.455 3.521 0.251 0.872 1.5323 0.85412 10 6 6 10 0.6000 0.6000 1.0000 R 0 rkATCA.... CWATCW 319 205 192 215 329 205 306 253.0000 308
positions_7nt_m5 6200_1lo1_A_3D-footprint_20130124_ positions_7nt_m5 6200_1lo1_A_3D-footprint_20130124_ 0.806 0.403 1.973 0.015 0.888 1.5614 0.87377 11 10 7 14 0.5000 0.6364 0.7000 R 4 ....CTCCAsg CTCNAGG... 174 343 248 284 260 216 246 253.0000 309
positions_8nt_m3 1784_MA0226.1_JASPAR_CORE_2009_ positions_8nt_m3 1784_MA0226.1_JASPAR_CORE_2009_ 0.772 0.450 1.959 0.183 0.880 1.6817 0.86900 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw YAATTAA 269 218 252 232 283 246 278 254.0000 310
positions_7nt_m2 2509_MA0124.1_JASPAR_CORE_2009_ positions_7nt_m2 2509_MA0124.1_JASPAR_CORE_2009_ 0.808 0.404 2.199 0.041 0.882 1.4209 0.85952 11 7 6 12 0.5000 0.5455 0.8571 R 5 .....TAAGkb TAAGTA. 170 339 233 271 320 178 271 254.5714 311
positions_6nt_m1 2820_PF0133.1_JASPAR_CORE_2009_ positions_6nt_m1 2820_PF0133.1_JASPAR_CORE_2009_ 0.763 0.407 5.573 0.287 0.875 2.0008 0.87498 10 13 8 15 0.5333 0.8000 0.6154 R 2 ..ATCAAAsd RTCARHMW..... 300 333 113 209 248 304 297 257.7143 312
dyads_m3 5997_1bc7_C_3D-footprint_20130124_ dyads_m3 5997_1bc7_C_3D-footprint_20130124_ 0.785 0.428 0.088 -0.137 0.894 1.2741 0.86697 11 6 6 11 0.5455 0.5455 1.0000 R 0 bwtCCT..... CATCCT 228 272 345 329 293 128 214 258.4286 313
dyads_m5 2533_MA0267.1_JASPAR_CORE_2009_ dyads_m5 2533_MA0267.1_JASPAR_CORE_2009_ 0.777 0.453 3.736 0.146 0.866 1.8757 0.86165 12 7 7 12 0.5833 0.5833 1.0000 R 3 ...CGCTGGA.. TGCTGGK 255 213 183 245 314 284 317 258.7143 314
positions_6nt_m1 2430_MA0036.1_JASPAR_CORE_2009_ positions_6nt_m1 2430_MA0036.1_JASPAR_CORE_2009_ 0.814 0.407 0.110 -0.082 0.889 1.1148 0.85068 10 5 5 10 0.5000 0.5000 1.0000 R 1 .kATCA.... YATCC 159 332 340 304 335 96 245 258.7143 315
positions_8nt_m5 6730_4b06_A_3D-footprint_20130124_ positions_8nt_m5 6730_4b06_A_3D-footprint_20130124_ 0.835 0.417 1.421 0.018 0.876 1.4830 0.85648 12 6 6 12 0.5000 0.5000 1.0000 R 6 ......CGGAtg CGGAAG 134 306 289 282 325 189 291 259.4286 316
positions_6nt_m1 1763_MA0204.1_JASPAR_CORE_2009_ positions_6nt_m1 1763_MA0204.1_JASPAR_CORE_2009_ 0.778 0.467 2.561 0.025 0.864 1.6311 0.84949 10 6 6 10 0.6000 0.6000 1.0000 R 0 rkATCA.... GTRTCA 253 174 221 279 338 235 322 260.2857 317
dyads_m4 2362_CN0199.1_JASPAR_CORE_2009_ dyads_m4 2362_CN0199.1_JASPAR_CORE_2009_ 0.775 0.431 0.369 -0.146 0.891 2.1725 0.89578 11 17 10 18 0.5556 0.9091 0.5882 R -7 ymTCCAGAcc. .......TTTCCAGAGC 259 264 310 337 117 322 228 262.4286 318
oligos_6nt_mkv3 2560_MA0302.1_JASPAR_CORE_2009_ oligos_6nt_mkv3 2560_MA0302.1_JASPAR_CORE_2009_ 0.756 0.403 6.109 0.380 0.871 2.0590 0.87317 12 11 8 15 0.5333 0.6667 0.7273 D 4 ....AGAGATcd ahAGATCy... 335 342 90 188 264 312 307 262.5714 319
positions_8nt_m3 1761_MA0202.1_JASPAR_CORE_2009_ positions_8nt_m3 1761_MA0202.1_JASPAR_CORE_2009_ 0.769 0.449 1.895 0.131 0.878 1.7115 0.86785 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw YAATTAR 276 225 263 252 286 255 284 263.0000 320
positions_6nt_m1 1793_MA0235.1_JASPAR_CORE_2009_ positions_6nt_m1 1793_MA0235.1_JASPAR_CORE_2009_ 0.779 0.545 0.856 -0.117 0.865 1.8961 0.86090 10 7 7 10 0.7000 0.7000 1.0000 R 0 rkATCAA... HAATCAA 251 60 296 317 317 288 321 264.2857 321
positions_8nt_m3 1756_MA0197.1_JASPAR_CORE_2009_ positions_8nt_m3 1756_MA0197.1_JASPAR_CORE_2009_ 0.762 0.410 0.461 -0.100 0.896 1.4606 0.87792 12 8 7 13 0.5385 0.5833 0.8750 R 5 .....TAATTcw TMATTAW. 304 322 305 311 227 185 206 265.7143 322
positions_6nt_m2 6016_1cf7_A_3D-footprint_20130124_ positions_6nt_m2 6016_1cf7_A_3D-footprint_20130124_ 0.834 0.417 0.108 -0.155 0.885 1.3750 0.86181 11 7 6 12 0.5000 0.5455 0.8571 R 5 .....TAGCGC TCGCGC. 136 309 341 344 313 165 261 267.0000 323
positions_8nt_m3 1786_MA0228.1_JASPAR_CORE_2009_ positions_8nt_m3 1786_MA0228.1_JASPAR_CORE_2009_ 0.758 0.442 1.980 0.153 0.877 1.7160 0.86767 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....TAATTcw TMATTAR 322 238 246 240 288 257 286 268.1429 324
positions_7nt_m2 2715_PF0028.1_JASPAR_CORE_2009_ positions_7nt_m2 2715_PF0028.1_JASPAR_CORE_2009_ 0.751 0.404 6.877 0.370 0.863 1.9221 0.85995 11 9 7 13 0.5385 0.6364 0.7778 D -2 wwATATA.... ..AwwwATA 350 338 62 196 318 293 325 268.8571 325
dyads_m3 2763_PF0076.1_JASPAR_CORE_2009_ dyads_m3 2763_PF0076.1_JASPAR_CORE_2009_ 0.798 0.435 1.977 -0.012 0.863 1.6420 0.84898 11 6 6 11 0.5455 0.5455 1.0000 R 1 .wtCCTG.... TACCTG 198 258 247 293 340 237 323 270.8571 326
oligos_6nt_mkv3 5048_ZmHOX2a_2__Athamap_20091028_ oligos_6nt_mkv3 5048_ZmHOX2a_2__Athamap_20091028_ 0.780 0.455 0.100 -0.141 0.884 1.6231 0.87131 12 7 7 12 0.5833 0.5833 1.0000 R 5 .....GAGATcd CMGATCA 245 207 343 331 276 232 263 271.0000 327
dyads_m3 2476_MA0086.1_JASPAR_CORE_2009_ dyads_m3 2476_MA0086.1_JASPAR_CORE_2009_ 0.775 0.423 3.538 0.138 0.861 1.6677 0.84781 11 6 6 11 0.5455 0.5455 1.0000 R 1 .wtCCTG.... CACCTG 262 285 188 250 344 244 329 271.7143 328
dyads_m1 6287_1qqa_A_3D-footprint_20130124_ dyads_m1 6287_1qqa_A_3D-footprint_20130124_ 0.759 0.405 4.470 0.370 0.868 2.1091 0.87164 15 8 8 15 0.5333 0.5333 1.0000 R 4 ....CGCCAGCG... CGCNTGCG 320 337 153 195 272 315 313 272.1429 329
dyads_m3 7625_SNAI1_f1_HOCOMOCO_v9_ dyads_m3 7625_SNAI1_f1_HOCOMOCO_v9_ 0.781 0.497 0.095 -0.107 0.873 1.7766 0.86536 11 7 7 11 0.6364 0.6364 1.0000 R 0 bwtCCTG.... CCACCTG 242 130 344 314 299 272 305 272.2857 330
dyads_m3 7626_SNAI2_f1_HOCOMOCO_v9_ dyads_m3 7626_SNAI2_f1_HOCOMOCO_v9_ 0.782 0.427 3.898 0.128 0.854 1.7574 0.84377 11 6 6 11 0.5455 0.5455 1.0000 R 1 .wtCCTG.... CACCTG 239 277 181 253 349 269 339 272.4286 331
dyads_m3 2699_PF0012.1_JASPAR_CORE_2009_ dyads_m3 2699_PF0012.1_JASPAR_CORE_2009_ 0.782 0.427 3.898 0.128 0.854 1.7574 0.84377 11 6 6 11 0.5455 0.5455 1.0000 R 1 .wtCCTG.... CACCTG 239 277 181 253 349 269 339 272.4286 332
dyads_m3 7472_JUNB_f1_HOCOMOCO_v9_ dyads_m3 7472_JUNB_f1_HOCOMOCO_v9_ 0.757 0.408 3.525 0.231 0.875 1.7538 0.86623 11 9 7 13 0.5385 0.6364 0.7778 R 4 ....CTGACnk MTGACTC.. 328 329 191 218 295 267 298 275.1429 333
dyads_m3 4940_Hr46_DrosophilaTF_1.1_ dyads_m3 4940_Hr46_DrosophilaTF_1.1_ 0.794 0.433 1.930 -0.003 0.861 1.6664 0.84787 11 6 6 11 0.5455 0.5455 1.0000 R 5 .....TGACnk TGACCC 206 260 256 290 343 243 328 275.1429 334
positions_6nt_m1 2193_CN0030.1_JASPAR_CORE_2009_ positions_6nt_m1 2193_CN0030.1_JASPAR_CORE_2009_ 0.775 0.436 3.223 0.043 0.858 2.5529 0.87447 10 15 9 16 0.5625 0.9000 0.6000 R -6 rkATCAAAs. ......ATTTCAAAG 263 256 201 270 257 347 333 275.2857 335
positions_8nt_m3 6026_1co0_A_3D-footprint_20130124_ positions_8nt_m3 6026_1co0_A_3D-footprint_20130124_ 0.767 0.447 1.667 0.040 0.869 1.8347 0.86318 12 7 7 12 0.5833 0.5833 1.0000 R 1 .sTGGTAA.... CTGGTAC 286 228 280 272 306 277 311 280.0000 336
positions_7nt_m2 6637_3jxb_CD_3D-footprint_20130124_ positions_7nt_m2 6637_3jxb_CD_3D-footprint_20130124_ 0.752 0.418 2.027 0.002 0.874 2.5231 0.88768 11 17 10 18 0.5556 0.9091 0.5882 R 1 .wATATAAGkb TATTTAAGNN....... 346 304 241 288 161 346 304 284.2857 337
positions_6nt_m2 6459_2isz_B_3D-footprint_20130124_ positions_6nt_m2 6459_2isz_B_3D-footprint_20130124_ 0.788 0.430 1.714 -0.040 0.858 1.7031 0.84620 11 6 6 11 0.5455 0.5455 1.0000 R 2 ..CCCTAG... CCCTAA 214 268 278 297 346 253 334 284.2857 338
positions_7nt_m2 6434_2h7h_A_3D-footprint_20130124_ positions_7nt_m2 6434_2h7h_A_3D-footprint_20130124_ 0.779 0.425 0.553 -0.053 0.869 1.5764 0.85203 11 6 6 11 0.5455 0.5455 1.0000 R 4 ....ATAAGk. ATGAGT 250 279 302 300 334 219 312 285.1429 339
dyads_m3 7700_ZEB1_do_HOCOMOCO_v9_ dyads_m3 7700_ZEB1_do_HOCOMOCO_v9_ 0.753 0.411 2.916 0.131 0.863 1.6429 0.84894 11 6 6 11 0.5455 0.5455 1.0000 R 1 .wtCCTG.... CACCTG 340 321 206 251 341 238 324 288.7143 340
dyads_m3 7552_NR4A3_f1_HOCOMOCO_v9_ dyads_m3 7552_NR4A3_f1_HOCOMOCO_v9_ 0.789 0.425 0.250 -0.149 0.874 1.7587 0.86604 11 9 7 13 0.5385 0.6364 0.7778 R 4 ....CTGACnk STGACCT.. 213 281 325 339 297 271 300 289.4286 341
positions_8nt_m3 1787_MA0229.1_JASPAR_CORE_2009_ positions_8nt_m3 1787_MA0229.1_JASPAR_CORE_2009_ 0.772 0.416 0.671 -0.092 0.876 1.7300 0.86714 12 8 7 13 0.5385 0.5833 0.8750 R 5 .....TAATTcw YAATTAR. 268 310 300 306 291 264 290 289.8571 342
dyads_m3 5598_NR2F1_full_HumanTF_1.0_ dyads_m3 5598_NR2F1_full_HumanTF_1.0_ 0.753 0.439 1.855 -0.012 0.866 1.8803 0.86148 11 8 7 12 0.5833 0.6364 0.8750 R 4 ....CTGACnk TTGACCY. 342 246 268 294 315 286 318 295.5714 343
positions_6nt_m2 2471_MA0081.1_JASPAR_CORE_2009_ positions_6nt_m2 2471_MA0081.1_JASPAR_CORE_2009_ 0.801 0.401 0.209 -0.140 0.865 1.6160 0.85019 11 7 6 12 0.5000 0.5455 0.8571 R -1 TCCCCT..... .TCCKSW 188 351 329 330 336 230 319 297.5714 344
positions_8nt_m4 2609_MA0372.1_JASPAR_CORE_2009_ positions_8nt_m4 2609_MA0372.1_JASPAR_CORE_2009_ 0.756 0.432 0.363 -0.177 0.876 1.9837 0.87551 14 8 8 14 0.5714 0.5714 1.0000 R 1 .gAAGGGGG..... TWAGGGGT 336 263 312 349 244 302 293 299.8571 345
positions_7nt_m2 6358_1ytb_A_3D-footprint_20130124_ positions_7nt_m2 6358_1ytb_A_3D-footprint_20130124_ 0.766 0.409 0.658 -0.044 0.868 2.1103 0.87160 11 12 8 15 0.5333 0.7273 0.6667 R -4 wwATATAA... ....TTATATAC 288 327 301 299 274 317 315 303.0000 346
positions_6nt_m2 2448_MA0057.1_JASPAR_CORE_2009_ positions_6nt_m2 2448_MA0057.1_JASPAR_CORE_2009_ 0.755 0.465 0.728 -0.108 0.838 2.5938 0.85765 11 10 8 13 0.6154 0.7273 0.8000 R -2 TCCCCTAG... ..MCCCMTMV 337 182 299 315 323 348 349 307.5714 347
positions_6nt_m2 7511_MZF1_f1_HOCOMOCO_v9_ positions_6nt_m2 7511_MZF1_f1_HOCOMOCO_v9_ 0.766 0.447 0.267 -0.129 0.841 2.2282 0.84921 11 8 7 12 0.5833 0.6364 0.8750 R -1 TCCCCTA.... .TCCCCMY 291 231 323 323 339 329 348 312.0000 348
dyads_m2 2606_MA0368.1_JASPAR_CORE_2009_ dyads_m2 2606_MA0368.1_JASPAR_CORE_2009_ 0.760 0.409 1.735 -0.030 0.853 2.0516 0.85531 13 7 7 13 0.5385 0.5385 1.0000 R 2 ..CCTGGCG.... CTTGGCR 315 325 277 296 328 310 341 313.1429 349
dyads_m3 7471_ITF2_f1_HOCOMOCO_v9_ dyads_m3 7471_ITF2_f1_HOCOMOCO_v9_ 0.751 0.438 0.386 -0.132 0.850 2.1029 0.85352 11 8 7 12 0.5833 0.6364 0.8750 R -1 bwtCCTG.... .RCACCTG 351 250 309 324 331 314 345 317.7143 350
positions_7nt_m4 2733_PF0046.1_JASPAR_CORE_2009_ positions_7nt_m4 2733_PF0046.1_JASPAR_CORE_2009_ 0.753 0.430 0.184 -0.133 0.853 2.3492 0.86453 14 8 8 14 0.5714 0.5714 1.0000 R 6 ......yAGCCAyy CAGCCAAW 339 266 331 326 301 335 342 320.0000 351
dyads_m3 6324_1t2k_D_3D-footprint_20130124_ dyads_m3 6324_1t2k_D_3D-footprint_20130124_ 0.751 0.410 0.128 -0.147 0.857 1.7201 0.84544 11 6 6 11 0.5455 0.5455 1.0000 R 4 ....CTGACn. TTGACA 349 324 336 338 348 259 336 327.1429 352 
 Host name	biow
 Job started	2014-09-05.204211
 Job done	2014-09-05.205202
 Seconds	439.35
	user	439.35
	system	31.3
	cuser	82.91
;	csystem	36.47