; convert-matrix  -v 1 -i $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Input files
;	input	/vh/rsat/rsat/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/vh/rsat/rsat/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	10	6	28	2	0	1	1	0	32	0	1	2	7	6	5
c	8	12	2	3	29	0	31	34	1	0	32	0	9	8	8
g	5	4	3	5	2	33	1	0	0	33	1	29	2	14	16
t	11	12	1	24	3	0	1	0	1	1	0	3	16	6	5
//
a	17	7	1	3	4	0	3	0	2	50	3	15	15
c	15	11	44	45	1	1	0	52	0	1	2	13	15
g	10	16	7	3	3	52	50	0	52	1	0	10	12
t	13	21	3	4	47	2	2	3	1	3	50	17	13
//
a	7	18	11	0	0	0	0	52	0	13	12
c	17	11	8	52	52	0	0	0	52	13	9
g	14	9	7	0	0	0	52	0	0	13	14
t	14	14	26	0	0	52	0	0	0	13	17
//
a	5	11	0	0	0	37	0	37	1	9	12
c	12	11	0	37	37	0	0	0	22	15	6
g	7	6	0	0	0	0	37	0	8	4	12
t	13	9	37	0	0	0	0	0	6	9	7
//
a	18	10	25	4	0	1	1	0	0	49	18	13
c	10	10	9	43	1	49	0	0	0	0	7	12
g	14	18	14	3	46	1	0	51	51	1	12	18
t	9	13	3	1	4	0	50	0	0	1	14	8
//
; Host name	biow
; Job started	2014-09-05.202758
; Job done	2014-09-05.202758
; Seconds	0.26
;	user	0.26
;	system	0.02
;	cuser	0
;	csystem	0