; convert-matrix -v 1 -i $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.txt
; Input files
; input /vh/rsat/rsat/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /vh/rsat/rsat/public_html/tmp/apache/2014/09/05/peak-motifs.2014-09-05.202657_2014-09-05.202657_8OTbPR/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 2 1 6 0 0 0 0 0 0 1 1
c 2 3 0 0 0 0 0 6 6 1 1
g 2 2 0 6 6 6 6 0 0 4 4
t 0 0 0 0 0 0 0 0 0 0 0
//
a 2 3 7 0 7 0 7 7 0 0 1
c 1 1 0 0 0 0 0 0 0 1 2
g 1 1 0 0 0 0 0 0 7 3 2
t 3 2 0 7 0 7 0 0 0 3 2
//
a 1 2 0 0 0 10 0 0 0 2 3
c 4 2 10 0 10 0 0 0 10 2 2
g 4 6 0 0 0 0 10 10 0 5 5
t 1 0 0 10 0 0 0 0 0 1 0
//
a 3 1 5 1 0 1 0 11 1 0 0 11 1 2
c 1 4 3 9 10 8 5 0 0 11 11 0 4 6
g 4 1 1 0 0 1 1 0 10 0 0 0 1 0
t 3 5 2 1 1 1 5 0 0 0 0 0 5 3
//
a 2 1 0 6 0 0 0 0 6 0 1
c 0 0 6 0 6 0 6 6 0 2 1
g 0 2 0 0 0 0 0 0 0 4 3
t 4 3 0 0 0 6 0 0 0 0 1
//
; Host name biow
; Job started 2014-09-05.202845
; Job done 2014-09-05.202845
; Seconds 0.26
; user 0.26
; system 0.02
; cuser 0
; csystem 0