; convert-matrix -v 1 -i $RSAT/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
; input /vh/rsat/rsat/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /vh/rsat/rsat/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 1 2 0 5 0 0 5 5 0 3 2
c 1 1 0 0 0 5 0 0 0 0 0
g 1 1 5 0 0 0 0 0 0 2 1
t 2 1 0 0 5 0 0 0 5 0 2
//
; Host name biow
; Job started 2014-09-06.011305
; Job done 2014-09-06.011305
; Seconds 0.25
; user 0.25
; system 0.02
; cuser 0
; csystem 0