; convert-matrix -v 1 -i $RSAT/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt ; Input files ; input /vh/rsat/rsat/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf ; Input format transfac ; Output files ; output /vh/rsat/rsat/public_html/tmp/apache/2014/09/06/peak-motifs.2014-09-06.011249_2014-09-06.011249_H1RYPN/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 1 2 0 5 0 0 5 5 0 3 2 c 1 1 0 0 0 5 0 0 0 0 0 g 1 1 5 0 0 0 0 0 0 2 1 t 2 1 0 0 5 0 0 0 5 0 2 // ; Host name biow ; Job started 2014-09-06.011305 ; Job done 2014-09-06.011305 ; Seconds 0.25 ; user 0.25 ; system 0.02 ; cuser 0 ; csystem 0